Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_001440.1 Length=2216 Score E Sequences producing significant alignments: (Bits) Value seq16461 361 8e-97 seq7838 82.4 1e-12 >seq16461 Length=146837 Score = 361 bits (400), Expect = 8e-97 Identities = 230/246 (93%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 1972 TGCTATAAACTGTCTGAAGTCACTAAACGTTTTTTACGGTGAACGGGTTGTCCATCCAGC 2031 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2 TGCTATAAACTGCCTGAAGTCACTAAACGTTTT--ACGGTGAACGGGTTGTCCATCCAGC 59 Query 2032 TTACGGCTAAAATGGTCAGTCGTGGAGAAATCCACGCCAGCAGATTTACAAATCTCTGAG 2091 |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| Sbjct 60 TTACGGCTAAAATGGTCAGTCGTGGAGAGATCCACGCCGG-AGATTTACAAATCTCTGAG 118 Query 2092 GCGCCTTTGAAACCATCTCCTAGGTTTCTTCGGAAGGACTTCGGTCCGTGTACCTCTAGC 2151 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 119 GCGCCTTTGAAACCATCTCCTAGGTTTCTTCGGAAGGACTTCGGTCCGTGTACTTCTAGC 178 Query 2152 ACAACGTGCTAGTTTCAGGGTACGGGTG-cccccccACTTTCGTGGGGGCCTCCAAAAGG 2210 |||| ||||||||| || ||||||||| |||||||||| | |||||||||||||||| Sbjct 179 ACAAGATGCTAGTTTTAGAGTACGGGTGCCCCCCCCACTCTGTGGGGGGCCTCCAAAAGG 238 Query 2211 AGACCA 2216 |||||| Sbjct 239 AGACCA 244 Score = 82.4 bits (90), Expect = 1e-12 Identities = 59/67 (88%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 1950 GCGGGACGTGAGTTGGCAGTTCTGCTATAAACTGTCTGAAGTCACTAAACGTTTTTTACG 2009 |||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| Sbjct 840 GCGGGATCTGAGTTGGCAGTATTGCTATAAACTGCCTGAAGTCACTAAACG--TTTTACG 783 Query 2010 GTGAACG 2016 |||| || Sbjct 782 GTGAGCG 776 >seq7838 Length=81957 Score = 82.4 bits (90), Expect = 1e-12 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 1950 GCGGGACGTGAGTTGGCAGTTCTGCTATAAACTGTCTGAAGTCACTAAACGTTTTTTACG 2009 |||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| Sbjct 62 GCGGGATCTGAGTTGGCAGTATTGCTATAAACTGCCTGAAGTCACTAAACG--TTTTACG 5 Query 2010 GTGA 2013 |||| Sbjct 4 GTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6979939184040