Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_004008.1 Length=3158 Score E Sequences producing significant alignments: (Bits) Value seq16461 82.4 2e-12 seq7838 82.4 2e-12 >seq16461 Length=146837 Score = 82.4 bits (90), Expect = 2e-12 Identities = 95/127 (75%), Gaps = 12/127 (9%) Strand=Plus/Minus Query 2126 GGTCGACGGAGTCGCCGGATGTGGAAAAACCACAGCAATTAAAGAAACATTCCGGTTTGA 2185 ||||||||||||||| || ||||| ||||||||||||||||| | |||| ||||| Sbjct 1707 GGTCGACGGAGTCGCTGGTTGTGGGAAAACCACAGCAATTAA--ATCCATT----TTTGA 1654 Query 2186 A------AAGGATATCATTGTCACCGCCAACAGAAAATCCGCTGAAGATGTGCGCAAGGC 2239 | | || || ||||| ||||| |||| |||||||| ||||||| || | ||| Sbjct 1653 ACCGTCCACTGACATGATTGTTACCGCGAACAAGAAATCCGCCCAAGATGTACGTATGGC 1594 Query 2240 CATTTTC 2246 ||||| Sbjct 1593 ACTTTTC 1587 >seq7838 Length=81957 Score = 82.4 bits (90), Expect = 2e-12 Identities = 95/127 (75%), Gaps = 12/127 (9%) Strand=Plus/Minus Query 2126 GGTCGACGGAGTCGCCGGATGTGGAAAAACCACAGCAATTAAAGAAACATTCCGGTTTGA 2185 ||||||||||||||| || ||||| ||||||||||||||||| | |||| ||||| Sbjct 929 GGTCGACGGAGTCGCTGGTTGTGGGAAAACCACAGCAATTAA--ATCCATT----TTTGA 876 Query 2186 A------AAGGATATCATTGTCACCGCCAACAGAAAATCCGCTGAAGATGTGCGCAAGGC 2239 | | || || ||||| ||||| |||| |||||||| ||||||| || | ||| Sbjct 875 ACCGTCCACTGACATGATTGTTACCGCGAACAAGAAATCCGCCCAAGATGTACGTATGGC 816 Query 2240 CATTTTC 2246 ||||| Sbjct 815 ACTTTTC 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9989974353150