Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq2869 105 4e-19 seq29658 102 5e-18 seq16874 100 2e-17 >seq2869 Length=57491 Score = 105 bits (116), Expect = 4e-19 Identities = 65/67 (97%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 8849 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-AT 8907 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 35471 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTAT 35530 Query 8908 T-GCTCT 8913 | ||||| Sbjct 35531 TAGCTCT 35537 >seq29658 Length=1595399 Score = 102 bits (112), Expect = 5e-18 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569908 GCTTGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 569966 >seq16874 Length=185766 Score = 100 bits (110), Expect = 2e-17 Identities = 64/67 (96%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 8849 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-AT 8907 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 49865 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGGTTTGTTGCACGTAT 49924 Query 8908 T-GCTCT 8913 | ||||| Sbjct 49925 TAGCTCT 49931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28395799796760