Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq9148 150 7e-33 seq134 150 7e-33 seq88 150 7e-33 seq26 150 7e-33 seq15 150 7e-33 seq7 150 7e-33 seq3 150 7e-33 seq2 150 7e-33 seq5 145 3e-31 seq14 143 1e-30 seq6 143 1e-30 seq18 141 4e-30 seq10 141 4e-30 seq20 136 2e-28 seq9 136 2e-28 seq8 132 2e-27 seq24 129 2e-26 seq19 127 8e-26 seq4 127 8e-26 seq25 123 9e-25 seq17 123 9e-25 seq28 118 4e-23 seq1 78.8 4e-11 >seq9148 Length=160301 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 75252 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 75193 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 75192 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 75135 >seq134 Length=637607 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 130048 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 130107 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 130108 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 130165 >seq88 Length=878102 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 460785 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 460844 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 460845 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 460902 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 682740 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 682681 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 682680 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 682623 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 781341 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 781400 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 781401 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 781458 >seq26 Length=23272750 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 22216193 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 22216134 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 22216133 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 22216076 >seq15 Length=91555666 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 80540673 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 80540732 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 80540733 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 80540790 Score = 131 bits (144), Expect = 6e-27 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 3 TTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGC 62 |||||||| ||||||| |||||| |||||| | | |||| ||||| || |||| || || Sbjct 22662758 TTATGATATTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATATGATTGGCTGC 22662699 Query 63 TTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||| |||| | || ||||||| |||||||||| ||||||||||||||||||||| Sbjct 22662698 TTCAATAGGATATTTTCTCCTGGTTGGAGGAGAAACTACCAAACGTCTAGCATTCCC 22662642 >seq7 Length=42802127 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 9408772 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 9408831 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 9408832 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 9408889 Score = 141 bits (156), Expect = 4e-30 Identities = 102/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 23988770 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 23988829 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| ||| ||||||||||||||||| ||||||||||||| Sbjct 23988830 CTTCAATGGGATCTTTTCTCCTAGTCCGAGGAGAAATTACCAAATGTCTAGCATTCCC 23988887 Score = 125 bits (138), Expect = 3e-25 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | |||| || | Sbjct 18926674 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGAGATTGGCTG 18926615 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCC 118 |||||||| ||||| || |||| | || |||||||||||||| |||||||||||||| Sbjct 18926614 CTTCAATGAGATCTTTTCTCCTAGCCGAAGGAGAAATTACCATACGTCTAGCATTCC 18926558 >seq3 Length=37363027 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 6285625 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 6285684 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 6285685 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 6285742 Score = 141 bits (156), Expect = 4e-30 Identities = 102/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | |||| ||||| | ||||| || | Sbjct 6267404 TTTATGATACTATGCAATTTGTGCAACCAGATGTGTATACAATATGCATGGGATTGGCTG 6267345 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| || |||||||||||||||||||||||||||||| Sbjct 6267344 CTTCAATGGGATCTTTTCTCCTGGCCGAAGGAGAAATTACCAAACGTCTAGCATTCCC 6267287 >seq2 Length=106994729 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 34028122 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 34028181 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 34028182 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 34028239 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||| ||| || ||| |||||| ||| |||| ||||| | ||||| | | Sbjct 14527514 TTTATGATACTATACAATTTTTGCAACCAGATGTCCATACAATATGCATGGGATTGGTTG 14527573 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||| |||||||| | || |||| | ||||||||||||||||||| ||||||||||||| Sbjct 14527574 CTTTAATGGGATATTTTCTCCTAGCCGGAGGAGAAATTACCAAATGTCTAGCATTCCC 14527631 >seq5 Length=56898656 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 24499488 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 24499547 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| |||||||||||||||||||| |||||||||||| Sbjct 24499548 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACTTCTAGCATTCCC 24499605 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| ||||||| || | Sbjct 48745417 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATAGGATTGGCTG 48745358 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||| |||| || |||||| ||||||| ||||||||||||||||||||||||| Sbjct 48745357 CTTCAATGGTATCTTTTCTCCTGGCCGGAGGATAAATTACCAAACGTCTAGCATTCCC 48745300 Score = 129 bits (142), Expect = 2e-26 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| || ||| || |||| ||||| | ||||| || | Sbjct 49771422 TTTATGATACTATGCAATTTGTGCAAC-AGATGTCA-TACAATATGCATGGGATTGGCTG 49771479 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| |||||||||||||||||| ||||||||||||| Sbjct 49771480 CTTCAATGGGATCTTTTCTCCTGGCTGGAGGAGAAATTACCAAATGTCTAGCATTCCC 49771537 >seq14 Length=44799946 Score = 143 bits (158), Expect = 1e-30 Identities = 102/117 (87%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 2562252 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 2562311 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCC 118 |||||||||||||| || |||||| |||||||||||||||||||||||||||| ||| Sbjct 2562312 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCAATCC 2562368 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||| | | | |||| ||||| | ||||| | | Sbjct 2602441 TTTATGATACTATGCAATTTGTGCAACCAAATGTGCATACAATATGCATGGGATTGGTTG 2602500 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| |||| ||||||||||||||||| |||||||||| Sbjct 2602501 CTTCAATGGGATCTTTTCTCCTGGCCGGAAGAGAAATTACCAAACGTTTAGCATTCCC 2602558 >seq6 Length=79162310 Score = 143 bits (158), Expect = 1e-30 Identities = 102/117 (87%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 7472662 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 7472721 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCC 118 |||||||||||||| || |||||| |||||||||||||||||||||||||||| ||| Sbjct 7472722 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCAATCC 7472778 Score = 140 bits (154), Expect = 1e-29 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||| ||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 62809104 TTTATGATACTATACAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 62809163 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATT 116 |||||||||||||| || |||||| |||||||||||||||||||||||||||||| Sbjct 62809164 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATT 62809218 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| | ||| | | |||| ||||| | ||||| ||| Sbjct 36469304 TTTATGATACTATGCAATTTGTGCAAATAGATGTGCATACAATATGCATGGGATTGGCCA 36469245 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| || ||||||||||||||||| ||||||||||||| Sbjct 36469244 CTTCAATGGGATCTTTTCTCCTAGTTAGAGGAGAAATTACCAAATGTCTAGCATTCCC 36469187 Score = 123 bits (136), Expect = 9e-25 Identities = 99/118 (84%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | || | ||||| | ||||| || | Sbjct 59322641 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATAAA-TATGCATGGGATTGGCTG 59322583 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||| ||||| || |||||| ||||||||||||| |||||| |||||||| ||| Sbjct 59322582 CTTCAATGTGATCTTTTCTCCTGGCCGGAGGAGAAATTGCCAAACATCTAGCATCCCC 59322525 >seq18 Length=57801308 Score = 141 bits (156), Expect = 4e-30 Identities = 102/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 32732588 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 32732647 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| | |||||||||||||||||| |||||||||||| Sbjct 32732648 CTTCAATGGGATCTTTTCTCCTGGCCAGAGGAGAAATTACCAAACATCTAGCATTCCC 32732705 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | |||||| | | |||| |||| | ||||| || | Sbjct 26878484 TTTATGATACTATGCAATTTGTACAACCAGATGTGCATACAATATGTATGGGATTGGCTG 26878543 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| |||||||| |||||||||||||||||||||||| Sbjct 26878544 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGTAATTACCAAACGTCTAGCATTCCC 26878601 >seq10 Length=91128445 Score = 141 bits (156), Expect = 4e-30 Identities = 101/116 (87%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||||| | | |||| ||||| | ||||| || | Sbjct 26846932 TTTATGATACTATGCAATTTGTGCAACCAGTTGTGCATACAATATGCATGGGATTGGCTG 26846873 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 26846872 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTACCAAACGTCTAGCATTC 26846817 >seq20 Length=65574513 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| | ||| | ||||| || | Sbjct 58474176 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATGTGCATGGGATTGGCTG 58474235 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 58474236 CTTCAATGGGATCTTTTCTCCTGGCTAGAGGAGAAATTACCAAACGTCTAGCATTCCC 58474293 >seq9 Length=117247901 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||| ||||||||||||| |||| |||||| | | |||| ||||| | ||||| || | Sbjct 45905932 TTTATAATACTATGCAAATCGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 45905873 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||||| ||||||||||||| ||||||||||||| ||||| Sbjct 45905872 CTTCAATGGGATCTTTTCTCCTGGCCGGAGGAGAAATTCCCAAACGTCTAGCGTTCCC 45905815 Score = 122 bits (134), Expect = 3e-24 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||| | | ||||| | | Sbjct 38375204 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATACATGGGATTGGTTG 38375145 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATT 116 |||||||||||||| || || ||| |||||||||||||||||||||||||||| Sbjct 38375144 CTTCAATGGGATCTTTTCTCATGGCTAGAGGAGAAATTACCAAACGTCTAGCATT 38375090 >seq8 Length=100353538 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||| ||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 44322354 TTTATGATACTATACAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 44322413 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| |||||| || |||| || |||||||||||||||||| ||||||||||||| Sbjct 44322414 CTTCAATAGGATCTTTTCTCCTAGTTGGAGGAGAAATTACCAAATGTCTAGCATTCCC 44322471 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||| ||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 44324348 TTTATGATACTATACAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 44324407 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| |||||| || |||| || |||||||||||||||||| ||||||||||||| Sbjct 44324408 CTTCAATAGGATCTTTTCTCCTAGTTGGAGGAGAAATTACCAAATGTCTAGCATTCCC 44324465 Score = 89.7 bits (98), Expect = 2e-14 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || | Sbjct 27310850 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTG 27310791 Query 62 CTTCAATGGGATCTGTTATCCT 83 |||||||||||||| || |||| Sbjct 27310790 CTTCAATGGGATCTTTTCTCCT 27310769 >seq24 Length=55877068 Score = 129 bits (142), Expect = 2e-26 Identities = 92/106 (87%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 14 TGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGAT 73 ||||| |||||| |||||| | | |||| ||||| | ||||| || ||||||||||||| Sbjct 5415576 TGCAACTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCTGCTTCAATGGGAT 5415635 Query 74 CTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 || || ||||||||||||||||||||||||||| |||||||||||| Sbjct 5415636 CTTTTCTCCTGGTCGGAGGAGAAATTACCAAACATCTAGCATTCCC 5415681 >seq19 Length=70911690 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||||||| |||||| | ||| | | |||| |||| || ||||| || | Sbjct 4517291 TTTATGATATTATGCAATTTGTGCAGCTAGATGTGCATACAATATGTGTGGGATTGGCTG 4517350 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| | | ||||||||||||||||||||||||||||||| Sbjct 4517351 CTTCAATGGGATCTTTTCTCCTAGCCAGAGGAGAAATTACCAAACGTCTAGCATTCCC 4517408 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | || | | ||| | ||||| || | Sbjct 6193537 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATAGAATGTGCATGGGATTGGCTG 6193478 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||| || | ||||||||||| ||||||||||||||||||||||||| Sbjct 6193477 CTTCAATGGGATTGTTTCTGTTGGTCGGAGGAAAAATTACCAAACGTCTAGCATTCCC 6193420 Score = 118 bits (130), Expect = 4e-23 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| || || | ||| | | |||| ||||| | |||| || | Sbjct 14619220 TTTATGATACTATGCAATTTCTGTAGCTAGATGTGCATACAATATGCATGGGATAGGCTG 14619279 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||| |||||||||| || |||||||| || |||||||||||||||||||||||||||| Sbjct 14619280 CTTGAATGGGATCTTTTCTCCTGGTCAGAAGAGAAATTACCAAACGTCTAGCATTCCC 14619337 >seq4 Length=78750349 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| | ||| | | |||| ||||| | ||||| ||| Sbjct 60994849 TTTATGATACTATGCAATTTGTGCAAATAGATGTGCATACAATATGCATGGGATTGGCCA 60994790 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| || ||||||||||||||||| ||||||||||||| Sbjct 60994789 CTTCAATGGGATCTTTTCTCCTAGTTAGAGGAGAAATTACCAAATGTCTAGCATTCCC 60994732 Score = 104 bits (114), Expect = 9e-19 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||| ||| ||||| |||||| | | |||| ||||| | ||||| | | Sbjct 44693326 TTTATGATACTATACAATTTGTGTAACCAGATGTGCATACAATATGCATGGGATTGGTTG 44693385 Query 62 CTTCAATGGGATC-TGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117 |||| |||||||| | || ||||| ||| ||||||||||||||||||||| |||| Sbjct 44693386 CTTCGATGGGATCTTTTTCTCCTGACTGGATGAGAAATTACCAAACGTCTAGTATTC 44693442 >seq25 Length=50193149 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||||||||| || |||||| |||||| | |||| ||||| | ||||| || Sbjct 10966719 TTTATGATACTATGTAATTTGTGCAACCAGATGTGTATACAATATGCATGGGATTGGCTA 10966660 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| | | ||||||||||||||||||||||| ||||||| Sbjct 10966659 CTTCAATGGGATCTTTTCTCCTAGCCAGAGGAGAAATTACCAAACGTCTAACATTCCC 10966602 >seq17 Length=39386523 Score = 123 bits (136), Expect = 9e-25 Identities = 97/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| | | |||| ||||| | |||| || Sbjct 24277289 TTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATCGATCG 24277230 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117 |||||||||||||| || |||| | |||||| ||||||||||||||||||||||| Sbjct 24277229 CTTCAATGGGATCTTTTCTCCTAGCTGGAGGACAAATTACCAAACGTCTAGCATTC 24277174 >seq28 Length=3047688 Score = 118 bits (130), Expect = 4e-23 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||| |||||||| ||||||||| |||| | | | |||| ||||| | ||||| || Sbjct 2076281 TTTATAATACTATGTAAATTGTGCAACCAAATGTGCATACAATATGCATGGGATTGGCTA 2076222 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || |||| | ||||||||||||| ||||| |||||||||||| Sbjct 2076221 CTTCAATGGGATCTTTTCTCCTAGCTGGAGGAGAAATTATCAAACATCTAGCATTCCC 2076164 >seq1 Length=92291805 Score = 78.8 bits (86), Expect = 4e-11 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||||||||||||||||| |||||| |||||| | | |||| ||||| | ||||| || Sbjct 19894479 CTTTATGATACTATGCAATTTGTGCAACCAGATGTGCATACAATATGCATGGGATTGGCT 19894420 Query 61 GCTTCAATGGG 71 ||||||||||| Sbjct 19894419 GCTTCAATGGG 19894409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19044494288640