Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20nil_20[refseq_20GCF_5F001879475.1_202016-09-01] 3,418 sequences; 735,230,855 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq3418 132 2e-27 seq2480 132 2e-27 >seq3418 Length=161897 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||||||| ||||| |||| || ||||| ||||| |||||||||||| Sbjct 73447 TTTATGATATGATGCAAACTGTGCGGCCAGGTGTCAGTACAATATGCATAGGATTAGCCG 73388 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| ||||||||| ||| |||| |||||||| |||| ||||||||| Sbjct 73387 CTTCAATGGGATCTTTTATCCTGGCCGGGGGAGCAATTACCAGACGTGCAGCATTCCC 73330 >seq2480 Length=6774461 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||| ||| ||||| |||| || ||||| ||||| |||||||||||| Sbjct 5793231 TTTATGATATGATGTAAACTGTGCGGCCAGGTGTCAGTACAATATGCATAGGATTAGCCG 5793172 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| ||||||||| ||| |||| |||||||| |||| |||||||||| Sbjct 5793171 CTTCAATGGGATCTTTTATCCTGGCCGGGGGAGCAATTACCAGACGTGTAGCATTCCC 5793114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045687962240