Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ipomoea_20trifida_20[genbank_20GCA_5F000978395.1_202015-04-07] 77,400 sequences; 512,990,763 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq27446 87.8 7e-14 >seq27446 Length=5565 Score = 87.8 bits (96), Expect = 7e-14 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||||||| ||||| |||| || ||||| ||||| |||||||||||| Sbjct 5488 TTTATGATATGATGCAAACTGTGCGGCCAGGTGTCAGTACAATATGCATAGGATTAGCCG 5547 Query 62 CTTCAATGGGATCTGTTA 79 |||||||||||||| ||| Sbjct 5548 CTTCAATGGGATCTTTTA 5565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19030276032000