Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq44463 127 8e-26 seq10805 127 8e-26 seq40470 111 6e-21 seq41581 109 2e-20 seq38435 105 3e-19 seq31431 105 3e-19 seq26545 100 1e-17 seq14632 100 1e-17 seq11143 87.8 7e-14 seq41814 84.2 8e-13 >seq44463 Length=150519 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||||||||| | |||||||||| Sbjct 68552 TTTATGATACTATGCAATTTGTACAACCGGATGTACAGACAGTATGCATGGGATTAGCCG 68493 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || | ||| || ||| ||||||||||||||||||||||||| Sbjct 68492 CTTCAATGGGATCTTTTGTTTTGGCAGGCGGAAAAATTACCAAACGTCTAGCATTCCC 68435 >seq10805 Length=3959 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||||||||| | |||||||||| Sbjct 2086 TTTATGATACTATGCAATTTGTACAACCGGATGTACAGACAGTATGCATGGGATTAGCCG 2027 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || | ||| || ||| ||||||||||||||||||||||||| Sbjct 2026 CTTCAATGGGATCTTTTGTTTTGGCAGGCGGAAAAATTACCAAACGTCTAGCATTCCC 1969 >seq40470 Length=5570 Score = 111 bits (122), Expect = 6e-21 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||| ||||||||| |||| | |||| | | | ||| ||||| | |||||||||| Sbjct 5037 TTTATGAAACTATGCAATTTGTACAACCAAATGTACAGACAATATGCATGGGATTAGCCG 5096 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| ||||| |||| ||| || ||| ||||||||||||||||||||||||| Sbjct 5097 TTTCAATGAGATCT-TTATTTTGGCAGGCGGAAAAATTACCAAACGTCTAGCATTCCC 5153 >seq41581 Length=99682 Score = 109 bits (120), Expect = 2e-20 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||||||| |||| | || || | | ||||||||| | |||||| ||| Sbjct 46836 TTTATGATAATATGCAATTTGTACAGCCGGATGTACAGACAGTATGCATGGGATTAACCG 46895 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| ||| | ||| |||||||||||||||||| |||||| Sbjct 46896 CTTCAATGGGATCTTTTATTTTGGCATGCGGAAAAATTACCAAACGTCTAGGATTCCC 46953 >seq38435 Length=70689 Score = 105 bits (116), Expect = 3e-19 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || || | | ||| ||||| | |||||| || Sbjct 65933 TTTATGATACTATGCAATTTGTACAGCCGGATGTACAGACAATATGCATGGGATTAAACG 65874 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||| ||||| |||| ||| | ||| ||||||||||||||||||||||||| Sbjct 65873 CTTCAATGAGATCTTTTATTTTGGCATGCGGAAAAATTACCAAACGTCTAGCATTCCC 65816 >seq31431 Length=20382 Score = 105 bits (116), Expect = 3e-19 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | | || | | ||||||||| | |||||| ||| Sbjct 20106 TTTATGATACTATGCAATTTGTACAGCTGGATGTACAAACAGTATGCATGGGATTAACCG 20165 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||| ||||| |||| | | | ||| ||||||||||||||||||||||||| Sbjct 20166 CTTCAATGAGATCTTTTATTTTTGCATGCGGAAAAATTACCAAACGTCTAGCATTCCC 20223 >seq26545 Length=6842 Score = 100 bits (110), Expect = 1e-17 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || || | | ||| ||||| | |||||| || Sbjct 4332 TTTATGATACTATGCAATTTGTACAGCCGGATGTACAGACAATATGCATTGGATTAACCA 4391 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| ||| ||| ||||||||||| ||||||||||||| Sbjct 4392 CTTCAATGGGATCTTTTATTTTGGCATCCGGAAAAATTACCAAATGTCTAGCATTCCC 4449 >seq14632 Length=5207 Score = 100 bits (110), Expect = 1e-17 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || || | | ||| ||||| | |||||| || Sbjct 3290 TTTATGATACTATGCAATTTGTACAGCCGGATGTACAGACAATATGCATTGGATTAACCA 3349 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| ||| ||| ||||||||||| ||||||||||||| Sbjct 3350 CTTCAATGGGATCTTTTATTTTGGCATCCGGAAAAATTACCAAATGTCTAGCATTCCC 3407 >seq11143 Length=4947 Score = 87.8 bits (96), Expect = 7e-14 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||| ||||||||||| |||| | ||| | | ||| ||||| | |||| ||| Sbjct 4603 TTTATAATACTATGCAATTTGTATAGCTAGATGTACCGACAATATGCATGACATTAACCG 4662 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| || | ||| ||||||||||||||||| ||||||| Sbjct 4663 CTTCAATGGGATCTTTTATTTTGACATGCGGAAAAATTACCAAACGTCTAACATTCCC 4720 >seq41814 Length=445662 Score = 84.2 bits (92), Expect = 8e-13 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||||||| |||| | || | | |||||||||| | ||||| ||| Sbjct 8740 TTTATGATATTATGCAATTTGTATAGTCGGATGTACATACAGTATGCATGAGATTAACCG 8799 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117 |||||||||||||| |||| ||| | || | ||||||||||| || |||||| Sbjct 8800 CTTCAATGGGATCTTTTATTTTGGCATGCAGAAAGATTACCAAACGCCTCGCATTC 8855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19037137259520