Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq2981 127 8e-26
seq3 127 8e-26
seq2 122 3e-24
seq1 105 3e-19
seq9 104 9e-19
seq4 87.8 7e-14
>seq2981
Length=38664
Score = 127 bits (140), Expect = 8e-26
Identities = 99/118 (84%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||| | |||||| | | ||||||||| | |||||||| |
Sbjct 16550 TTTATGATACTATGCAATTTGTACAACCAGATGTACAAACAGTATGCATGGGATTAGCTG 16609
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 16610 CTTCAATGGGATCCTTTATTTTGGCAGGAGGCGAAATTACCAAACGTCTAGCATTTCC 16667
>seq3
Length=30153019
Score = 127 bits (140), Expect = 8e-26
Identities = 99/118 (84%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||| | |||||| | | ||||||||| | |||||||| |
Sbjct 20151490 TTTATGATACTATGCAATTTGTACAACCAGATGTACAAACAGTATGCATGGGATTAGCTG 20151431
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 20151430 CTTCAATGGGATCCTTTATTTTGGCAGGAGGCGAAATTACCAAACGTCTAGCATTTCC 20151373
>seq2
Length=24697652
Score = 122 bits (134), Expect = 3e-24
Identities = 96/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 5 ATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTT 64
|||||||||||||| |||| | |||||| | | ||||||||| | |||||||| ||||
Sbjct 13709328 ATGATACTATGCAATTTGTACAACCAGATGTACAAACAGTATGCATGGGATTAGCTGCTT 13709269
Query 65 CAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 13709268 CAATGGGATCCTTTATTTTGGCAGGAGGCGAAATTACCAAACGTCTAGCATTTCC 13709214
>seq1
Length=36457581
Score = 105 bits (116), Expect = 3e-19
Identities = 94/118 (80%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||| |||| || |||| | || ||| | | ||| ||||| | || ||||| |
Sbjct 14278269 TTTATGATAGTATGAAATTTGTACAACTAGATGTACAAACATTATGCATGGGGTTAGCTG 14278210
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 14278209 CTTCAATGGGATCCATTATTTTGGGAGGAGGCGAAATTACCAAACGTCTAGCATTACC 14278152
>seq9
Length=21753712
Score = 104 bits (114), Expect = 9e-19
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
|||||||||| |||||| |||| | |||||| | | ||| ||||| ||||||||||
Sbjct 7689654 TTTATGATACGATGCAATTTGTACAACCAGATGTACAAACAATATGCATAGGATTAGCTT 7689595
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATT 116
||||||| ||||| |||| ||| | ||| ||||||||||||||||||||||
Sbjct 7689594 CTTCAATAGGATCCATTATTTTGGGAGTAGGCAAAATTACCAAACGTCTAGCATT 7689540
>seq4
Length=27333975
Score = 87.8 bits (96), Expect = 7e-14
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 27 ACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGT 86
|||||| | | ||| ||||| | |||||||| ||||||||||| || |||| |||
Sbjct 16372617 ACCAGATGTACAAACAATATGCATGGGATTAGCTGCTTCAATGGGTTCCTTTATTTTGGC 16372676
Query 87 CGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||| ||||||||||||||||||||||| ||
Sbjct 16372677 AGGAGGCGAAATTACCAAACGTCTAGCATTTCC 16372709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19043572472640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |