Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq485 98.7 6e-17 seq7 82.4 4e-12 >seq485 Length=25194 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9112 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 9053 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 9052 GTATTAGCTCT 9042 >seq7 Length=27069033 Score = 82.4 bits (90), Expect = 4e-12 Identities = 57/62 (92%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| ||| Sbjct 13780592 GACCTTTTATCTAATAAATGCATTCCTTCCAGAAGTCGAGGTTTGTTGAACGTATTAGCT 13780651 Query 8912 CT 8913 || Sbjct 13780652 CT 13780653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28405754784132