Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_003499.1 Length=8512 Score E Sequences producing significant alignments: (Bits) Value seq19082 95.1 7e-16 >seq19082 Length=336771 Score = 95.1 bits (104), Expect = 7e-16 Identities = 193/279 (69%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 5311 TGAGTCAGATTATGAGGCCTTTGACGCATCGCAAGAT-CATTACATTGTCGCTTTCGAGA 5369 ||||||||| ||||| || ||||| |||| || || || | || | ||||| ||| Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTT-ATACTTGCTTTTGAGG 95563 Query 5370 TATGCTTGATGCGCTATCTTGGTTTGCCGAACGATCTCATAGAGGATTACAAATTCATTA 5429 | ||| || | | || ||| | | | || || | || |||||| || | | | Sbjct 95562 TTGCCTTATTGAGGAAGCTAGGTGTTTCTAGAGAGATCGTTGAT-ATTACATATCCTTGA 95504 Query 5430 AAACCCATTTGGGCTCAAAATTGGGTAATTTTGCGATCATGAGATTTTCTGGTGAGGCAA 5489 | | ||||||| || | | | || ||||||||| | ||||| ||| | ||||| Sbjct 95503 AGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATTT- 95445 Query 5490 GCACTTTTCTATTCAACACTATGGCGAATATGCTGTTCACGTTCTTGCAGTACGATTTGA 5549 |||| ||||| |||||||| | || || |||||||| || || || |||| ||||||| Sbjct 95444 GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTTGA 95385 Query 5550 AGGGTAATGAGCGAAT-CTGCTTTGCAGGTGATGATATG 5587 || | || || | ||| |||||||||||||||||| Sbjct 95384 AGAGAGGAGATAGATTGCTG-TTTGCAGGTGATGATATG 95347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27106988734592