Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_003499.1
Length=8512
Score E
Sequences producing significant alignments: (Bits) Value
seq19082 95.1 7e-16
>seq19082
Length=336771
Score = 95.1 bits (104), Expect = 7e-16
Identities = 193/279 (69%), Gaps = 6/279 (2%)
Strand=Plus/Minus
Query 5311 TGAGTCAGATTATGAGGCCTTTGACGCATCGCAAGAT-CATTACATTGTCGCTTTCGAGA 5369
||||||||| ||||| || ||||| |||| || || || | || | ||||| |||
Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTT-ATACTTGCTTTTGAGG 95563
Query 5370 TATGCTTGATGCGCTATCTTGGTTTGCCGAACGATCTCATAGAGGATTACAAATTCATTA 5429
| ||| || | | || ||| | | | || || | || |||||| || | | |
Sbjct 95562 TTGCCTTATTGAGGAAGCTAGGTGTTTCTAGAGAGATCGTTGAT-ATTACATATCCTTGA 95504
Query 5430 AAACCCATTTGGGCTCAAAATTGGGTAATTTTGCGATCATGAGATTTTCTGGTGAGGCAA 5489
| | ||||||| || | | | || ||||||||| | ||||| ||| | |||||
Sbjct 95503 AGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATTT- 95445
Query 5490 GCACTTTTCTATTCAACACTATGGCGAATATGCTGTTCACGTTCTTGCAGTACGATTTGA 5549
|||| ||||| |||||||| | || || |||||||| || || || |||| |||||||
Sbjct 95444 GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTTGA 95385
Query 5550 AGGGTAATGAGCGAAT-CTGCTTTGCAGGTGATGATATG 5587
|| | || || | ||| ||||||||||||||||||
Sbjct 95384 AGAGAGGAGATAGATTGCTG-TTTGCAGGTGATGATATG 95347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27106988734592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |