Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_006550.1 Length=9104 Score E Sequences producing significant alignments: (Bits) Value seq19082 95.1 7e-16 >seq19082 Length=336771 Score = 95.1 bits (104), Expect = 7e-16 Identities = 194/280 (69%), Gaps = 10/280 (4%) Strand=Plus/Minus Query 5685 GAGTCGGATTATGAGGCCTTCGACGCATCACAAGACGCCTATATTCTGGCCTTTGAGATC 5744 ||||| || ||||| || || || |||| || ||| | ||| || || |||||| | Sbjct 95620 GAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTTATACTTGCTTTTGAGGT- 95562 Query 5745 TGCCTCAT---GGAACATTTGTGTCTTCCCAGAGACCTAATTGAGGATTACAAGTATATC 5801 ||||| || |||| | |||| | | ||||| | |||| |||||| | | Sbjct 95561 TGCCTTATTGAGGAAGCTAGGTGTTT--CTAGAGAGATCGTTGAT-ATTACATATCCTTG 95505 Query 5802 AAGACACATTTGGGCTCTAAGTTGGGAAATTTTTCTATAATGAGATTCTCAGGTGAAGCA 5861 ||| ||||||| || | | ||||||||| | | ||||| || | |||||| Sbjct 95504 AAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATTT 95445 Query 5862 TCAACATTCCTCTTCAACACTATTGCCAACATGTTGTTCACTTTTTTGAAATATGATTTG 5921 || |||| || |||||||| |||| |||||| |||| || ||| |||| ||||||||| Sbjct 95444 GCA-CATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTTG 95386 Query 5922 AATGGTTCAGAGTCAAT-CTGCTTTGCAGGTGATGATATG 5960 || | ||| | | ||| |||||||||||||||||| Sbjct 95385 AAGAGAGGAGATAGATTGCTG-TTTGCAGGTGATGATATG 95347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29000256470656