Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_009383.1 Length=8590 Score E Sequences producing significant alignments: (Bits) Value seq19082 80.6 1e-11 >seq19082 Length=336771 Score = 80.6 bits (88), Expect = 1e-11 Identities = 164/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 5383 TGAGTCTGATTATGAAGCTTTTGATGCATCACAGGAC-CAGTACATGGTTGCATTTGAGG 5441 |||||| || |||||||| |||||| |||| |||||| || | || |||| ||||||| Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTT-ATACTTGCTTTTGAGG 95563 Query 5442 TTGCCGTTATGGA-ATATCTTGGCCTCCCAAGGGACTTGATAGAGGATTACAAATTCATT 5500 ||||| |||| || | || || | | || || | | || |||||| || | | Sbjct 95562 TTGCC-TTATTGAGGAAGCTAGGTGTTTCTAGAGAGATCGTTGA-TATTACATATCCTTG 95505 Query 5501 AAGACCCATCTCGGATCGAAATTGGGTAATTTTGCCATAATGCGATTCTCAGGGGAAGCG 5560 ||| | || | || |||| | | || |||||||| | ||| | || | || ||| Sbjct 95504 AAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAA-TT 95446 Query 5561 AGTACATTCTTGTTCAATACCATGGCGAATATGCTATTCACTTTCCTGAAGTATGA 5616 | ||||| ||||||| || | || || ||||| || || || ||||||||||| Sbjct 95445 TGCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGA 95390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27356439551168