Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_017859.1 Length=8601 Score E Sequences producing significant alignments: (Bits) Value seq19082 93.3 2e-15 >seq19082 Length=336771 Score = 93.3 bits (102), Expect = 2e-15 Identities = 192/280 (69%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 5370 TGAGTCGGATTATGAAGCTTTTGATGCAAGTCAGGATCAATACATCGTTGCTTTTGAGAT 5429 |||||| || |||||||| |||||| || |||||| | || ||||||||||| | Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTTATACTTGCTTTTGAGGT 95562 Query 5430 TGAGGTTATGCGCTATCTAGGC-TTGCCAGCAGATTTGATCGCTGAT--TATCTCTACAT 5486 || | || | | ||||| || | || ||| ||||| |||| || | | | | Sbjct 95561 TGCCTTATTGAGGAAGCTAGGTGTTTCTAG-AGA---GATCGTTGATATTACATATCCTT 95506 Query 5487 CAAGACCCATCTCGGTTCTAAGCTTGGAAATTTCGCGATTATGAGGTTCTCCGGTGAGGC 5546 ||| | || | || || | || |||||||| ||| | |||||||| ||||||| Sbjct 95505 GAAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATT 95446 Query 5547 CAGCACCTTCCTGTTCAACACTATGGCGAATATGCTTTTCACATTCTTGAGGTATGAAAT 5606 |||| || ||||||||||| | || || ||||| || ||||| ||| |||||| | Sbjct 95445 T-GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTT 95387 Query 5607 CAAAGGCCGCGAGAGGATATGTTTTGCAGGTGATGATATG 5646 || | | || || | |||||||||||||||||| Sbjct 95386 GAAGAGAGGAGATAGATTGCTGTTTGCAGGTGATGATATG 95347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27391618512480