Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_019029.1 Length=6956 Score E Sequences producing significant alignments: (Bits) Value seq19082 95.1 5e-16 >seq19082 Length=336771 Score = 95.1 bits (104), Expect = 5e-16 Identities = 323/491 (66%), Gaps = 17/491 (3%) Strand=Plus/Minus Query 4143 TTTTTATTCATGAAGACACAATTGTGTACTAAATTTGAGAAAAGGTTCTCTGATGCCAAA 4202 ||| | |||||||||| ||| | || || || | ||| |||| || || ||| || ||| Sbjct 95869 TTTATGTTCATGAAGAGCCAACTCTGCACAAAGTATGAAAAAATGTACTGTGAAGCAAAA 95810 Query 4203 GCTGGACAAACTTTGGCATGTTTCAGTCATATTATACTAAATAGATTTGCTGCCCCAACA 4262 ||||| || || | ||||||||| || || | ||| || | | | | | Sbjct 95809 GCTGGTCAGACACTTGCATGTTTCCAACACATAGTGCTATTTAAAATGGGTCCAGTCCTT 95750 Query 4263 AGATATGTTGAAAAGAAAATAAGTGAAGGTCT-TGGAAAGAACTTCTACATACATCAAAA 4321 ||| | |||||| | | |||| || | ||| | || ||||||||| Sbjct 95749 AGAGCCATAGAAAAGGCATTC-GTGAGGGCTTGTGGTGACTCTTTTTACATACATAGTTC 95691 Query 4322 GAAGAATTTTGATGTGTTAAATGATTGGGTAGTAGCAAAT----AAT--TTTGATTCTTA 4375 ||||||||||||| |||| | ||||| || | |||| ||| |||| | Sbjct 95690 AAAGAATTTTGATGCACTAAACAAATGGGTTGTGGAAAATGGAAAATCATTTGCGAGTGG 95631 Query 4376 TTGCTTAGAA-AGT--GATTATGAAGCTTTTGATTCATCCCAAGATTGCTTGATATTGGC 4432 || | || ||| || |||||||| ||||||||||| || || | ||| | || Sbjct 95630 TTCATCAGTTGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTTATACTTGC 95571 Query 4433 TTTTGAATATGAATTGCTCAAGTATCTTGGTTGGGATCAA-AGTTTAC-TTGATGATTAC 4490 |||||| || || | | | | || ||| | || | || | ||||| ||||| Sbjct 95570 TTTTGAGGTTGCCTTATTGAGGAAGCTAGGT--GTTTCTAGAGAGATCGTTGAT-ATTAC 95514 Query 4491 TTAGACCTCAAGTTTAATTTGGGGTGCAGATTGGGGAATCTGGCTGTAATGAGGTTTACT 4550 || | | ||| | |||||||||| ||| | || ||| | || || ||||||||||| Sbjct 95513 ATATCCTTGAAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACC 95454 Query 4551 GGCGAGTTTGGTACTTTTCTGTTTAACACTCTCGCAAACATGGTTTTCACATTCATGACA 4610 || || ||| | || |||||||| ||||| | ||||||||| | || ||||| ||| Sbjct 95453 GGTGAATTT-GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAG 95395 Query 4611 TATGACTTGAA 4621 ||||| ||||| Sbjct 95394 TATGATTTGAA 95384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22130764752640