Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_029085.1
Length=8628
Score E
Sequences producing significant alignments: (Bits) Value
seq19082 87.8 1e-13
>seq19082
Length=336771
Score = 87.8 bits (96), Expect = 1e-13
Identities = 194/282 (69%), Gaps = 12/282 (4%)
Strand=Plus/Minus
Query 5400 TGAATCGGATTATGAGGCCTTTGATGCCTCTCAAGAT-CAGTTCATAATGGCTTTTGAGA 5458
||| || || ||||| || |||||| | ||||| || || || ||| | |||||||||
Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTT-ATACTTGCTTTTGAGG 95563
Query 5459 TCGAGGTGATGAAGTACTTAGGGTTGCCAAGGGACCTAATCGCTGAT--TACAAGTTCAT 5516
| | | ||| | | |||| | | || || |||| |||| |||| | | |
Sbjct 95562 TTGCCTTATTGAGGAAGCTAGGTGTTTCTAGAGAG---ATCGTTGATATTACATATCCTT 95506
Query 5517 TAAGACCCATTTGGGGTCCAAGTTGGGCAATTTTGCAATTATGAGGTTCTCGGGGGAAGC 5576
||| | |||||||||| | | || |||||||| | |||||||| | || |||
Sbjct 95505 GAAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATT 95446
Query 5577 AAGTACGTTCCTGTTCAACACGATGGCTAATATGCTGTTCACTTTCATGAGGTATGATTT 5636
| || || ||||||||||| | || || |||||||| || || ||| |||||||||
Sbjct 95445 T-GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTT 95387
Query 5637 AAATGGGAGCGAAAGCATATGCT--TCGCAGGTGATGATATG 5676
|| | | || || || |||| | |||||||||||||||
Sbjct 95386 GAAGAGAGGAGATAG-AT-TGCTGTTTGCAGGTGATGATATG 95347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27477966872064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |