Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_029085.1 Length=8628 Score E Sequences producing significant alignments: (Bits) Value seq19082 87.8 1e-13 >seq19082 Length=336771 Score = 87.8 bits (96), Expect = 1e-13 Identities = 194/282 (69%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 5400 TGAATCGGATTATGAGGCCTTTGATGCCTCTCAAGAT-CAGTTCATAATGGCTTTTGAGA 5458 ||| || || ||||| || |||||| | ||||| || || || ||| | ||||||||| Sbjct 95621 TGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTT-ATACTTGCTTTTGAGG 95563 Query 5459 TCGAGGTGATGAAGTACTTAGGGTTGCCAAGGGACCTAATCGCTGAT--TACAAGTTCAT 5516 | | | ||| | | |||| | | || || |||| |||| |||| | | | Sbjct 95562 TTGCCTTATTGAGGAAGCTAGGTGTTTCTAGAGAG---ATCGTTGATATTACATATCCTT 95506 Query 5517 TAAGACCCATTTGGGGTCCAAGTTGGGCAATTTTGCAATTATGAGGTTCTCGGGGGAAGC 5576 ||| | |||||||||| | | || |||||||| | |||||||| | || ||| Sbjct 95505 GAAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGTTTACCGGTGAATT 95446 Query 5577 AAGTACGTTCCTGTTCAACACGATGGCTAATATGCTGTTCACTTTCATGAGGTATGATTT 5636 | || || ||||||||||| | || || |||||||| || || ||| ||||||||| Sbjct 95445 T-GCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTCTGAAGTATGATTT 95387 Query 5637 AAATGGGAGCGAAAGCATATGCT--TCGCAGGTGATGATATG 5676 || | | || || || |||| | ||||||||||||||| Sbjct 95386 GAAGAGAGGAGATAG-AT-TGCTGTTTGCAGGTGATGATATG 95347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27477966872064