Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_029301.1
Length=7925
Score E
Sequences producing significant alignments: (Bits) Value
seq19082 87.8 9e-14
>seq19082
Length=336771
Score = 87.8 bits (96), Expect = 9e-14
Identities = 347/534 (65%), Gaps = 29/534 (5%)
Strand=Plus/Minus
Query 4591 TTTCTTTTCATAAAGTCACAATTGTGCACAAAATATGAAAAGAAATTTTGCGATGCCAAA 4650
||| | ||||| ||| ||| | |||||||| |||||||| | | || || || |||
Sbjct 95869 TTTATGTTCATGAAGAGCCAACTCTGCACAAAGTATGAAAAAATGTACTGTGAAGCAAAA 95810
Query 4651 GCAGGTCAGACCTTGGCTTGTTTCTCTCATATGATTTTGTGCAAATTTGCGCCTTTAAAT 4710
|| |||||||| | || |||||| || || | | | ||| | | || | |
Sbjct 95809 GCTGGTCAGACACTTGCATGTTTCCAACACATAGTGCTATTTAAAATGGGTCCAGTCCTT 95750
Query 4711 AGGTACATCGAGAAAAAGGTGTC-TGAAGTCCTGCC-TGATCGTTTTTACATCCATCAGA 4768
|| ||| |||||| | || ||| | | || ||| ||||||||| |||
Sbjct 95749 AGAGCCAT--AGAAAAGGCATTCGTGAGGGCTTGTGGTGACTCTTTTTACATACATAGTT 95692
Query 4769 AAAAGAATTTTGATGAGCTTGAGGAGTGGGTT-----AAACG--ATATGACTTT--AGTG 4819
|||||||||||||| || | | |||||| ||| | | || | || ||||
Sbjct 95691 CAAAGAATTTTGATGCACTAAACAAATGGGTTGTGGAAAATGGAAAATCATTTGCGAGTG 95632
Query 4820 GCATATGCACTGAATCAGATTACGAGGCTTATGATTCATCTCAGG--ATGCTTACACTCT 4877
| || ||| ||||| || || || | |||||||||||||| | |||| | ||
Sbjct 95631 GTTCATCAGTTGAGTCAGAGTATGAAGCATTTGATTCATCTCAGGACACACTTATA--CT 95574
Query 4878 CGCATTTGAGTATGAGCTACTGAAGTATCTTGGAGTTTC----GAATTCTATGCTAAGTG 4933
|| |||||| || || ||| | | || || ||||| || || || |
Sbjct 95573 TGCTTTTGAGGTTGCCTTATTGAGGAAGCTAGGTGTTTCTAGAGAGATCGTTGAT----- 95519
Query 4934 ATTACCTTTATTTGAAGATGCATCTGAATTGCAAATTGGGTAATTTAGCTATAATGAGGT 4993
||||| | | |||||| | || || | | | | || ||||| || | |||||||
Sbjct 95518 ATTACATATCCTTGAAGGTCAATTTGGGGTCGAGACTCGGAAATTTTGCGGTGATGAGGT 95459
Query 4994 TCACGGGCGAATTCTGTACTTTCCTCTTCAACACACTAACGAACATGCTTTTTACATTCA 5053
| || || ||||| || || || || ||||||||| | | |||||||| ||||||||
Sbjct 95458 TTACCGGTGAATT-TGCACATTTCTGTTCAACACATTTGCAAACATGCTGTTTACATTTC 95400
Query 5054 TGAAATATGATGTTCGGAGGGCTCATGCCATTTGT-TTTGCCGGTGATGATATG 5106
|||| |||||| | ||| | || ||| | ||||| ||||||||||||
Sbjct 95399 TGAAGTATGATTTGAAGAGAGGAGAT-AGATTGCTGTTTGCAGGTGATGATATG 95347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 25229711435488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |