Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq52684 98.7 6e-17 seq34049 98.7 6e-17 seq33355 98.7 6e-17 seq29871 98.7 6e-17 seq24773 98.7 6e-17 seq23005 98.7 6e-17 seq22981 98.7 6e-17 seq22533 98.7 6e-17 seq19117 98.7 6e-17 seq10988 98.7 6e-17 seq6251 98.7 6e-17 seq5731 98.7 6e-17 seq2922 98.7 6e-17 seq701 98.7 6e-17 seq174 98.7 6e-17 seq40372 95.1 7e-16 seq29798 95.1 7e-16 seq22766 95.1 7e-16 seq32888 87.8 1e-13 seq52277 84.2 1e-12 seq48365 84.2 1e-12 >seq52684 Length=22553 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21148 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 21089 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 21088 GTATTAGCTCT 21078 >seq34049 Length=715 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 187 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 186 GTATTAGCTCT 176 >seq33355 Length=729 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 518 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 459 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 458 GTATTAGCTCT 448 >seq29871 Length=814 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 389 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 388 GTATTAGCTCT 378 >seq24773 Length=980 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 304 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 305 GTATTAGCTCT 315 >seq23005 Length=1053 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 589 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 648 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 649 GTATTAGCTCT 659 >seq22981 Length=1055 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 367 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 368 GTATTAGCTCT 378 >seq22533 Length=1081 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 251 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 310 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 311 GTATTAGCTCT 321 >seq19117 Length=1307 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 1025 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1026 GTATTAGCTCT 1036 >seq10988 Length=2449 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2218 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 2277 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 2278 GTATTAGCTCT 2288 >seq6251 Length=9118 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8530 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8589 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 8590 GTATTAGCTCT 8600 >seq5731 Length=12361 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12114 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 12055 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 12054 GTATTAGCTCT 12044 >seq2922 Length=15139 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8123 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8182 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 8183 GTATTAGCTCT 8193 >seq701 Length=17893 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16650 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 16709 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 16710 GTATTAGCTCT 16720 Score = 96.9 bits (106), Expect = 2e-16 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8210 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8269 Query 8905 G 8905 | Sbjct 8270 G 8270 >seq174 Length=26539 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11935 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 11994 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 11995 GTATTAGCTCT 12005 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4996 GCCCGCGTCGACCTTTTATCTAATAAATGCATCACTTCCAGAAGTCGGGGTTTGTTGCAC 5055 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 5056 GTATTAGCTCT 5066 >seq40372 Length=125850 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125832 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAT 125773 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 125772 GTATTAGCTCT 125762 >seq29798 Length=816 Score = 95.1 bits (104), Expect = 7e-16 Identities = 59/61 (97%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 284 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTC 225 Query 8913 T 8913 | Sbjct 224 T 224 >seq22766 Length=6982 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3829 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 3770 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 3769 GTATTAGCTCT 3759 >seq32888 Length=168383 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| Sbjct 58568 GTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCAGGGTTTGTTGCACGTATTA 58627 Query 8909 GCTCT 8913 ||||| Sbjct 58628 GCTCT 58632 >seq52277 Length=39153 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 26606 GCCCGCGTCGACCTTT-ATCTAATAAATTCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 26664 Query 8905 G 8905 | Sbjct 26665 G 26665 >seq48365 Length=80479 Score = 84.2 bits (92), Expect = 1e-12 Identities = 53/55 (96%), Gaps = 2/55 (4%) Strand=Plus/Plus Query 8861 TATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 64879 TATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 64933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28389421778784