Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq29729 111 6e-21 seq67198 80.6 1e-11 >seq29729 Length=2513 Score = 111 bits (122), Expect = 6e-21 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || ||| ||| |||| ||||| | ||||| | | Sbjct 721 TTTATGATACTATGCAATTTGTACGAC-AGAGGTCCATACAATATGCATGGGATTGGTCC 779 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | ||||||||||| |||| || || |||||||||| ||||||| |||||||||||| Sbjct 780 CAACAATGGGATCTTTTATTCTAGTTGGAGGAGAAAATACCAAATATCTAGCATTCCC 837 >seq67198 Length=8603 Score = 80.6 bits (88), Expect = 1e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 46 TGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAA 105 ||| | | ||| || || |||||||||||| |||| ||||| |||||||||||| ||||| Sbjct 7742 TGCATGGTATTGGCTGCGTCAATGGGATCTTTTATTCTGGTTGGAGGAGAAATTGCCAAA 7801 Query 106 CGTCTAGCATTCCC 119 |||| |||||||| Sbjct 7802 TGTCTGGCATTCCC 7815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19020986418240