Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq72672 95.1 7e-16 seq13045 82.4 4e-12 >seq72672 Length=1184 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 206 GCCCGTGTTGACCTTTTATCTAATAAATGCATCACTTCCAGAAGTCGGGGTTTGGTGCAG 147 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 146 GTATTAGCTCT 136 >seq13045 Length=2082 Score = 82.4 bits (90), Expect = 4e-12 Identities = 60/67 (90%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 8849 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-AT 8907 |||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| | || Sbjct 768 GTGTCGACCTTTTATCTAATAAATACATCCCTTCCAGAAGTTGGGGTTTGGTGCATGTAT 709 Query 8908 T-GCTCT 8913 | ||||| Sbjct 708 TAGCTCT 702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28367414453004