Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_003495.1 Length=3662 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 5e-13 >seq5 Length=40819286 Score = 84.2 bits (92), Expect = 5e-13 Identities = 157/222 (71%), Gaps = 19/222 (9%) Strand=Plus/Plus Query 2366 GTGTTGAATAGATGGATGGGAAAGTTGACTTTTCCTCAAGGCACTTCTCGGAGTGTTAAA 2425 ||||| || ||||||||||| || ||| |||||| || || || | || ||| | Sbjct 10344073 GTGTTTAAGAGATGGATGGGCAAATTGTCTTTTCTGCAGGGTCCTGC---GAATGTCATC 10344129 Query 2426 A---GGAT-GCCTCTCTCTATAGGAGGAGGAGCTGGTGCTAAAAGTGCTATTCTCATGAA 2481 | |||| | | ||||| ||||||||||||||| | || || || | | ||||| Sbjct 10344130 AAGTGGATTGTGATTTTCTATTGGAGGAGGAGCTGGTTC---AACTGATAAT-TGATGAA 10344185 Query 2482 TATGCCAAATGCAGTTCTTTCAATGTGGAGGTACTTTGTAGGAGATCTTGTTTTTGAAGT 2541 |||||||||||| || ||||| ||||||| || || |||| | | | ||||||||| | Sbjct 10344186 TATGCCAAATGC--TTATTTCATTGTGGAGATA--TTTTAGG-GGTGTAGTTTTTGAAAT 10344240 Query 2542 TTCAAAGATGACCTCTCCTTACATTAAATGTACAGTATCTTT 2583 |||||| ||| || ||| || | | |||| | | ||| Sbjct 10344241 ---AAAGATATCCTATCTTTATATCATCTCTACACTCTATTT 10344279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11606310122940