Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq1568 80.6 1e-11 >seq1568 Length=34994 Score = 80.6 bits (88), Expect = 1e-11 Identities = 87/111 (78%), Gaps = 7/111 (6%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATT-GTGCTACC-AGAAATCCGTAC----AGTATGCGTAGGAT 55 ||||||||||||||| |||| || | ||| ||| | | ||| | |||| || | Sbjct 19704 TTTATGATACTATGCCAATTTGTTCGACCCAGATGTACATACCAAAAATATGGCATGGGT 19645 Query 56 TAGCCG-CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAA 105 |||| | |||||||||||| | |||||||||| |||||||||||||||||| Sbjct 19644 TAGCTGGCTTCAATGGGATATTTTATCCTGGTTGGAGGAGAAATTACCAAA 19594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19044575950080