Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 2e-15 seq5 93.3 2e-15 seq4 93.3 2e-15 seq8 84.2 1e-12 >seq7 Length=22388614 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 4235 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 4176 >seq5 Length=18496696 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 6661888 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 6661947 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 6666887 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 6666946 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 6677428 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 6677487 Score = 91.5 bits (100), Expect = 8e-15 Identities = 57/59 (97%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 8857 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 6658081 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 6658139 Score = 84.2 bits (92), Expect = 1e-12 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct 6654285 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGTTTGTTGCACGTATTAGCTCT 6654343 >seq4 Length=25843236 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25516761 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25516820 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25568219 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25568278 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25578632 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25578691 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25587229 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25587288 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25598036 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25598095 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25619592 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25619651 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25630103 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25630162 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25632348 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25632407 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25641882 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25641941 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25651431 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25651490 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25661152 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25661211 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25670582 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25670641 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25680620 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25680679 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25689940 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25689999 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25698917 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25698976 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25717597 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25717656 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25727668 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25727727 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25737822 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25737881 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25748993 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25749052 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25759045 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25759104 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25767824 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25767883 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25777384 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25777443 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25787108 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25787167 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25797579 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25797638 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25814222 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25814281 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25832907 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25832966 Score = 93.3 bits (102), Expect = 2e-15 Identities = 58/60 (97%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25842928 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25842987 Score = 89.7 bits (98), Expect = 3e-14 Identities = 54/56 (96%), Gaps = 1/56 (2%) Strand=Plus/Plus Query 8859 TTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATTGCTCT 8913 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 25537171 TTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATAGCTCT 25537226 Score = 84.2 bits (92), Expect = 1e-12 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25526719 CCTTTTATCTAATAA-TGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25526777 Score = 84.2 bits (92), Expect = 1e-12 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 25547235 CCTTTTATCTAATAA-TGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 25547293 Score = 84.2 bits (92), Expect = 1e-12 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct 25558564 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGG-TTGTTGCACGTATTAGCTCT 25558622 Score = 84.2 bits (92), Expect = 1e-12 Identities = 57/60 (95%), Gaps = 3/60 (5%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct 25707702 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGTTTGTTGCACGTATTAGCTCT 25707760 >seq8 Length=22573980 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct 6835252 CCTTTTATCTAATCAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGTATTAGCTCT 6835193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28406338642176