Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq2187 145 3e-31 >seq2187 Length=56694 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| || | ||| ||||| | |||||||||| Sbjct 54207 TTTATGATACTATGCAATTTGTGCGACCAGATATACAGACAATATGCATGGGATTAGCCG 54266 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||| ||||||||| |||| || || ||| |||||||||||||||||||||||||||| Sbjct 54267 CTTCGATGGGATCTTTTATTCTTGTTGGAAGAGAAATTACCAAACGTCTAGCATTCCC 54324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18982264104960