Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq227 98.7 6e-17 seq839 95.1 7e-16 >seq227 Length=156916 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 139995 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGATTTGTTGCAC 140054 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 140055 GTATTAGCTCT 140065 >seq839 Length=95879 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 10755 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGATTTGTTGCAC 10814 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 10815 GTATTAGCTCT 10825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28308012729216