Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq16236 168 3e-38 seq76 168 3e-38 seq9 168 3e-38 seq1 163 1e-36 seq62 145 3e-31 >seq16236 Length=153324 Score = 168 bits (186), Expect = 3e-38 Identities = 108/118 (92%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| ||| |||| ||||| |||||||||||| Sbjct 72237 TTTATGATACTATGCAATTTGTGCGACCAGACGTCCATACAATATGCATAGGATTAGCCG 72178 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 72177 CGTCAATGGGATCTTTTATCCTGGTTGGAGGAGAAATTACCAAACGTCTAGCATTCCC 72120 >seq76 Length=139427 Score = 168 bits (186), Expect = 3e-38 Identities = 108/118 (92%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| ||| |||| ||||| |||||||||||| Sbjct 24988 TTTATGATACTATGCAATTTGTGCGACCAGACGTCCATACAATATGCATAGGATTAGCCG 25047 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 25048 CGTCAATGGGATCTTTTATCCTGGTTGGAGGAGAAATTACCAAACGTCTAGCATTCCC 25105 >seq9 Length=12411895 Score = 168 bits (186), Expect = 3e-38 Identities = 108/118 (92%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| ||| |||| ||||| |||||||||||| Sbjct 12130332 TTTATGATACTATGCAATTTGTGCGACCAGACGTCCATACAATATGCATAGGATTAGCCG 12130391 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 12130392 CGTCAATGGGATCTTTTATCCTGGTTGGAGGAGAAATTACCAAACGTCTAGCATTCCC 12130449 >seq1 Length=18577331 Score = 163 bits (180), Expect = 1e-36 Identities = 107/118 (91%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||||| ||| |||| ||||| | |||||||||| Sbjct 16059080 TTTATGATACTATGCAATTTGTGCAACCAGACGTCCATACAATATGCCTGGGATTAGCCG 16059021 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 16059020 CGTCAATGGGATCTTTTATCCTGGTTGGAGGAGAAATTACCAAACGTCTAGCATTCCC 16058963 >seq62 Length=188184 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||| | ||| |||| ||||| ||||||||||| Sbjct 66500 TTTATGATACTATGCAATTTGTGCGACCATACGTCCATACAATATGCATAGGATTAGCCA 66441 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||| |||||||||| |||||||||||||||||||||||| |||||| Sbjct 66440 TGTCAATGGGATCTTTTATCCTGGTTGGAGGAGAAATTACCAAACGTCTAATATTCCC 66383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19043017716480