Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq33182 98.7 6e-17 seq20537 98.7 6e-17 seq24072 93.3 2e-15 seq28156 91.5 8e-15 seq35095 89.7 3e-14 seq28044 89.7 3e-14 seq18177 87.8 1e-13 seq4859 87.8 1e-13 seq32925 86.0 4e-13 seq25376 86.0 4e-13 >seq33182 Length=4115 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2681 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 2622 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 2621 GTATTAGCTCT 2611 >seq20537 Length=47560 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 5924 GCCCGCGTTGACCTTTTATATAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 5865 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 5864 GTATTAGCTCT 5854 >seq24072 Length=9949 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 4257 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 4198 Query 8905 G 8905 | Sbjct 4197 G 4197 >seq28156 Length=27067 Score = 91.5 bits (100), Expect = 8e-15 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 6649 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTTGTTGCAC 6590 Query 8905 G-ATT-GCTCT 8913 ||| ||||| Sbjct 6589 RTATTAGCTCT 6579 >seq35095 Length=1155 Score = 89.7 bits (98), Expect = 3e-14 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct 596 GCCCGCGTCGACCTTTTATCTAATATATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 537 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 536 GTATTAGCTCT 526 >seq28044 Length=14440 Score = 89.7 bits (98), Expect = 3e-14 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 8472 GCCCGCGTCGACCTTTTATCTAATAAATACATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 8531 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 8532 GTATTAGCTCT 8542 >seq18177 Length=26406 Score = 87.8 bits (96), Expect = 1e-13 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3163 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGAGGTTTGTTGCAC 3113 >seq4859 Length=7908 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 7513 GCCCGCGTCGACCATTTATCTAATAAATGCATCCCTTCGAGAAGTCGGGGTTTGTTGCAC 7454 Query 8905 G 8905 | Sbjct 7453 G 7453 >seq32925 Length=16956 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||| | |||||||||||||||||||||||||||||||||| ||| |||||||| ||| Sbjct 2054 GCTCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAATTCGAGGTTTGTTTCAC 2113 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 2114 GTATTAGCTCT 2124 >seq25376 Length=19113 Score = 86.0 bits (94), Expect = 4e-13 Identities = 56/59 (95%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 8857 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 5800 CTTTTATCTAATCAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 5858 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || || |||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 17343 GCCCGCGTCGATCTTTTATCTAATCAATGCATCCCTTCCAGAAGTCGGGCTTTGTTGCAT 17402 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 17403 GTATTAGCTCT 17413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28391509862232