Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq20145 152 2e-33
seq24558 143 1e-30
seq30394 98.7 4e-17
seq26012 98.7 4e-17
seq25511 95.1 5e-16
seq25767 91.5 6e-15
seq16227 91.5 6e-15
seq26600 87.8 7e-14
seq23620 82.4 3e-12
seq23312 80.6 1e-11
>seq20145
Length=31693
Score = 152 bits (168), Expect = 2e-33
Identities = 105/119 (88%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60
|||||||||||||||||| ||||| |||||| |||| |||| ||||| |||||||||||
Sbjct 9837 CTTTATGATACTATGCAATATGTGCGACCAGATATCCATACAATATGCATAGGATTAGCC 9896
Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||||| ||||||| ||||||||||||||||| ||| ||||||| || |||||||
Sbjct 9897 GCTTCAATGTCATCTGTTGTCCTGGTCGGAGGAGAAGTTAACAAACGTATAACATTCCC 9955
>seq24558
Length=72334
Score = 143 bits (158), Expect = 1e-30
Identities = 103/119 (87%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60
|||||||||||||||||| ||||| |||||| |||| |||||||||| |||||||||||
Sbjct 65245 CTTTATGATACTATGCAATATGTGCGACCAGATATCCATACAGTATGCATAGGATTAGCC 65186
Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||| ||||||| || |||||||||||||| ||| ||||||| ||||||||||
Sbjct 65185 ATTTCAATATCATCTGTTGTCTTGGTCGGAGGAGAAGTTAACAAACGTATAGCATTCCC 65127
>seq30394
Length=1352
Score = 98.7 bits (108), Expect = 4e-17
Identities = 78/94 (83%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 17 AAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTG 76
|| |||||| |||||| | | |||| ||||| | |||||||||||| |||||||||
Sbjct 1305 AATTTGTGCGACCAGATGTTCATACAATATGCATGAGATTAGCCGCTTTGATGGGATCTT 1246
Query 77 TTATCCTGGTCGGAGGAGAAATTACCAAACGTCT 110
||| |||||| |||||||||||||||||| ||||
Sbjct 1245 TTACCCTGGTTGGAGGAGAAATTACCAAATGTCT 1212
>seq26012
Length=123249
Score = 98.7 bits (108), Expect = 4e-17
Identities = 78/94 (83%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 17 AAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTG 76
|| |||||| |||||| | | |||| ||||| | |||||||||||| |||||||||
Sbjct 6430 AATTTGTGCGACCAGATGTTCATACAATATGCATGAGATTAGCCGCTTTGATGGGATCTT 6371
Query 77 TTATCCTGGTCGGAGGAGAAATTACCAAACGTCT 110
||| |||||| |||||||||||||||||| ||||
Sbjct 6370 TTACCCTGGTTGGAGGAGAAATTACCAAATGTCT 6337
>seq25511
Length=90710
Score = 95.1 bits (104), Expect = 5e-16
Identities = 78/94 (83%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 4 TATGATA-CTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGC 62
||||||| |||||||| ||||||||| ||| || | |||| ||||| ||| ||||| ||
Sbjct 82542 TATGATAGCTATGCAATTTGTGCTACTAGATATTCATACAATATGCATAGAATTAGTTGC 82483
Query 63 TTCAATGGGATCTGTTATCCTGGTCGGAGGAGAA 96
||||||||||| | ||||||| |||||| || ||
Sbjct 82482 TTCAATGGGATTTTTTATCCTAGTCGGATGACAA 82449
>seq25767
Length=98279
Score = 91.5 bits (100), Expect = 6e-15
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||| ||| | | |||||| | | ||| |||| ||| | | | |||||| |
Sbjct 94016 TTTATGATAATATACGATTTGTGCCGCACAATGTCCATACAATATTCATGGAATTAGCTG 93957
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||| | |||| ||| ||||||||||||||||| | ||||| || |||| |||||
Sbjct 93956 CTTCAATAGAATCTTTTAACCTGGTCGGAGGAGAAACTCCCAAATGTATAGCTTTCCC 93899
>seq16227
Length=18099
Score = 91.5 bits (100), Expect = 6e-15
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 34 ATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGA 93
|||| |||| ||||| |||||||| ||||||||||| || |||| ||||||||||||||
Sbjct 14737 ATCCATACAATATGCATAGGATTAACCGCTTCAATGTCATTTGTTGTCCTGGTCGGAGGA 14796
Query 94 GAAATTACCAAACGT 108
||| ||| |||||||
Sbjct 14797 GAAGTTAACAAACGT 14811
>seq26600
Length=212103
Score = 87.8 bits (96), Expect = 7e-14
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 31 GAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGA 90
|| |||| |||| ||||| |||||||||| ||||||||||||||| ||| ||| ||||||
Sbjct 147130 GATATCCATACAATATGCATAGGATTAGCTGCTTCAATGGGATCTTTTACCCTAGTCGGA 147071
Query 91 GGAGAAATTACCAAAC 106
||| || ||| |||||
Sbjct 147070 GGACAACTTAACAAAC 147055
>seq23620
Length=61529
Score = 82.4 bits (90), Expect = 3e-12
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||||| |||| | || | | || ||||| ||| |||||| |
Sbjct 35832 TTTATGATACTATGCAATTTGTGCGACCAAATATTCATCCAATATGCATAGAATTAGCTG 35773
Query 62 CTTCAATGGGATCTG 76
||||||| |||||||
Sbjct 35772 CTTCAATAGGATCTG 35758
>seq23312
Length=57042
Score = 80.6 bits (88), Expect = 1e-11
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 31 GAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGA 90
|| |||| || | ||||| || |||| || ||||||||||||||| ||| ||| |||||
Sbjct 25703 GATATCCATATAATATGCATATGATTTGCTGCTTCAATGGGATCTTTTACCCTATTCGGA 25644
Query 91 GGAGAAATTACCAAACGTCTAGCATTCCC 119
||| || ||| ||||||| | | ||||||
Sbjct 25643 GGACAACTTAACAAACGTATGGTATTCCC 25615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19039343576640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |