Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq20145 152 2e-33 seq24558 143 1e-30 seq30394 98.7 4e-17 seq26012 98.7 4e-17 seq25511 95.1 5e-16 seq25767 91.5 6e-15 seq16227 91.5 6e-15 seq26600 87.8 7e-14 seq23620 82.4 3e-12 seq23312 80.6 1e-11 >seq20145 Length=31693 Score = 152 bits (168), Expect = 2e-33 Identities = 105/119 (88%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||||||||||||||||| ||||| |||||| |||| |||| ||||| ||||||||||| Sbjct 9837 CTTTATGATACTATGCAATATGTGCGACCAGATATCCATACAATATGCATAGGATTAGCC 9896 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||| ||||||| ||||||||||||||||| ||| ||||||| || ||||||| Sbjct 9897 GCTTCAATGTCATCTGTTGTCCTGGTCGGAGGAGAAGTTAACAAACGTATAACATTCCC 9955 >seq24558 Length=72334 Score = 143 bits (158), Expect = 1e-30 Identities = 103/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||||||||||||||||| ||||| |||||| |||| |||||||||| ||||||||||| Sbjct 65245 CTTTATGATACTATGCAATATGTGCGACCAGATATCCATACAGTATGCATAGGATTAGCC 65186 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||| ||||||| || |||||||||||||| ||| ||||||| |||||||||| Sbjct 65185 ATTTCAATATCATCTGTTGTCTTGGTCGGAGGAGAAGTTAACAAACGTATAGCATTCCC 65127 >seq30394 Length=1352 Score = 98.7 bits (108), Expect = 4e-17 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 17 AAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTG 76 || |||||| |||||| | | |||| ||||| | |||||||||||| ||||||||| Sbjct 1305 AATTTGTGCGACCAGATGTTCATACAATATGCATGAGATTAGCCGCTTTGATGGGATCTT 1246 Query 77 TTATCCTGGTCGGAGGAGAAATTACCAAACGTCT 110 ||| |||||| |||||||||||||||||| |||| Sbjct 1245 TTACCCTGGTTGGAGGAGAAATTACCAAATGTCT 1212 >seq26012 Length=123249 Score = 98.7 bits (108), Expect = 4e-17 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 17 AAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTG 76 || |||||| |||||| | | |||| ||||| | |||||||||||| ||||||||| Sbjct 6430 AATTTGTGCGACCAGATGTTCATACAATATGCATGAGATTAGCCGCTTTGATGGGATCTT 6371 Query 77 TTATCCTGGTCGGAGGAGAAATTACCAAACGTCT 110 ||| |||||| |||||||||||||||||| |||| Sbjct 6370 TTACCCTGGTTGGAGGAGAAATTACCAAATGTCT 6337 >seq25511 Length=90710 Score = 95.1 bits (104), Expect = 5e-16 Identities = 78/94 (83%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 4 TATGATA-CTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGC 62 ||||||| |||||||| ||||||||| ||| || | |||| ||||| ||| ||||| || Sbjct 82542 TATGATAGCTATGCAATTTGTGCTACTAGATATTCATACAATATGCATAGAATTAGTTGC 82483 Query 63 TTCAATGGGATCTGTTATCCTGGTCGGAGGAGAA 96 ||||||||||| | ||||||| |||||| || || Sbjct 82482 TTCAATGGGATTTTTTATCCTAGTCGGATGACAA 82449 >seq25767 Length=98279 Score = 91.5 bits (100), Expect = 6e-15 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||| ||| | | |||||| | | ||| |||| ||| | | | |||||| | Sbjct 94016 TTTATGATAATATACGATTTGTGCCGCACAATGTCCATACAATATTCATGGAATTAGCTG 93957 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | |||| ||| ||||||||||||||||| | ||||| || |||| ||||| Sbjct 93956 CTTCAATAGAATCTTTTAACCTGGTCGGAGGAGAAACTCCCAAATGTATAGCTTTCCC 93899 >seq16227 Length=18099 Score = 91.5 bits (100), Expect = 6e-15 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 34 ATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGA 93 |||| |||| ||||| |||||||| ||||||||||| || |||| |||||||||||||| Sbjct 14737 ATCCATACAATATGCATAGGATTAACCGCTTCAATGTCATTTGTTGTCCTGGTCGGAGGA 14796 Query 94 GAAATTACCAAACGT 108 ||| ||| ||||||| Sbjct 14797 GAAGTTAACAAACGT 14811 >seq26600 Length=212103 Score = 87.8 bits (96), Expect = 7e-14 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 31 GAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGA 90 || |||| |||| ||||| |||||||||| ||||||||||||||| ||| ||| |||||| Sbjct 147130 GATATCCATACAATATGCATAGGATTAGCTGCTTCAATGGGATCTTTTACCCTAGTCGGA 147071 Query 91 GGAGAAATTACCAAAC 106 ||| || ||| ||||| Sbjct 147070 GGACAACTTAACAAAC 147055 >seq23620 Length=61529 Score = 82.4 bits (90), Expect = 3e-12 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| |||| | || | | || ||||| ||| |||||| | Sbjct 35832 TTTATGATACTATGCAATTTGTGCGACCAAATATTCATCCAATATGCATAGAATTAGCTG 35773 Query 62 CTTCAATGGGATCTG 76 ||||||| ||||||| Sbjct 35772 CTTCAATAGGATCTG 35758 >seq23312 Length=57042 Score = 80.6 bits (88), Expect = 1e-11 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 31 GAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGA 90 || |||| || | ||||| || |||| || ||||||||||||||| ||| ||| ||||| Sbjct 25703 GATATCCATATAATATGCATATGATTTGCTGCTTCAATGGGATCTTTTACCCTATTCGGA 25644 Query 91 GGAGAAATTACCAAACGTCTAGCATTCCC 119 ||| || ||| ||||||| | | |||||| Sbjct 25643 GGACAACTTAACAAACGTATGGTATTCCC 25615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19039343576640