Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq25211 98.7 6e-17 seq9011 93.3 2e-15 seq2316 89.7 3e-14 seq15840 86.0 4e-13 seq14034 86.0 4e-13 seq25222 84.2 1e-12 seq23045 84.2 1e-12 seq26536 82.4 4e-12 seq10560 78.8 5e-11 >seq25211 Length=87857 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85416 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 85357 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 85356 GTATTAGCTCT 85346 >seq9011 Length=6205 Score = 93.3 bits (102), Expect = 2e-15 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5915 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 5865 >seq2316 Length=2226 Score = 89.7 bits (98), Expect = 3e-14 Identities = 58/61 (95%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| Sbjct 590 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGAGGTTTGTTGCACGTATTAGCTC 649 Query 8913 T 8913 | Sbjct 650 T 650 >seq15840 Length=22139 Score = 86.0 bits (94), Expect = 4e-13 Identities = 57/61 (93%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||| Sbjct 8085 ACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCAGGGTTTGTTGCACGTATTAGCTC 8144 Query 8913 T 8913 | Sbjct 8145 T 8145 >seq14034 Length=19513 Score = 86.0 bits (94), Expect = 4e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903 ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 5446 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAAGGTTTGTTGCA 5395 >seq25222 Length=88602 Score = 84.2 bits (92), Expect = 1e-12 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGC 8902 |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 88345 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTAGC 88297 >seq23045 Length=54208 Score = 84.2 bits (92), Expect = 1e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 15143 GCCCGCGTCGACCATTTATCTTATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 15202 Query 8905 G 8905 | Sbjct 15203 G 15203 >seq26536 Length=152591 Score = 82.4 bits (90), Expect = 4e-12 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||||||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct 102465 TTGACCTTTTATCTAATTAATGCATCCCTTCCAGAAGTCGAGGTTTGTTGTAC 102413 >seq10560 Length=10975 Score = 78.8 bits (86), Expect = 5e-11 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||||||||||||| || ||||||| |||||| ||||||||||||| ||| ||| Sbjct 4926 GACCTTTTATCTAATAAATGTATTCCTTCCAAAAGTCGAGGTTTGTTGCACGTATTAGCT 4985 Query 8912 CT 8913 || Sbjct 4986 CT 4987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28395575137644