Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 4e-12 >seq7 Length=21614486 Score = 82.4 bits (90), Expect = 4e-12 Identities = 60/67 (90%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 8849 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-AT 8907 || ||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| || Sbjct 21435919 GTATTGACCTTTTATCTAATAAATGCATCCTTTCTAGAAGTCAGGGTATGTTGCACGTAT 21435860 Query 8908 T-GCTCT 8913 | ||||| Sbjct 21435859 TAGCTCT 21435853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28406262264468