Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= NC_008183.1 Length=6364 Score E Sequences producing significant alignments: (Bits) Value seq43208 78.8 4e-11 >seq43208 Length=343 Score = 78.8 bits (86), Expect = 4e-11 Identities = 54/60 (90%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 5651 TAGCTCTGCACGCTGCTATCAAAATAAGGATCGTGTGCCCAGTCCCGGTTAG-AAGGACA 5709 ||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||| || Sbjct 95 TAGCTCTGCACGCCGCTATTAAAATAAGGATCGTGTGCCCAGCTCCGGTTAGTAAGGGCA 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20203992154976