Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq44971 136 2e-28 seq44970 136 2e-28 >seq44971 Length=1204 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||| |||| ||||||| |||| | ||||| | | |||||||||||||||||||||| Sbjct 814 TTTTTGATGTTATGCAATTTGTAGAAGCAGAAGTACAGACAGTATGCGTAGGATTAGCCG 755 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| || | |||||||||||||||||||||||||||||||| Sbjct 754 CTTCAATGGGATCTCTTATTTTGTTAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 697 >seq44970 Length=802 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||| |||| ||||||| |||| | ||||| | | |||||||||||||||||||||| Sbjct 412 TTTTTGATGTTATGCAATTTGTAGAAGCAGAAGTACAGACAGTATGCGTAGGATTAGCCG 353 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| |||| || | |||||||||||||||||||||||||||||||| Sbjct 352 CTTCAATGGGATCTCTTATTTTGTTAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19030847037120