Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_002035.1 Length=3050 Score E Sequences producing significant alignments: (Bits) Value seq110 823 0.0 >seq110 Length=811921 Score = 823 bits (912), Expect = 0.0 Identities = 498/526 (95%), Gaps = 0/526 (0%) Strand=Plus/Minus Query 1873 GTTATGACACCGACCAATTCGAAAAGCTTTTATTCTCAGGCGATGATTCTCTAGGATTTT 1932 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 253922 GTTACGATACCGACCAATTCGAAAAGCTTTTATTCTCAGGCGATGATTCTCTAGGATTTT 253863 Query 1933 CACTGCTTCCCCCTGTTGGTGACCCGAGTAAATTCACAACTCTTTTCAACATGGAAGCTA 1992 || ||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | Sbjct 253862 CAGTGCTTCCCCCTGTTGGTGATCCGAGTAAATTCACAACTCTCTTTAACATGGAAGCCA 253803 Query 1993 AGGTGATGGAACCTGCCGTACCATATATTTGTTCGAAGTTCTTACTCTCTGACGAGTTCG 2052 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 253802 AGGTGATGGAACCTGCAGTGCCATATATTTGTTCGAAGTTCTTACTCTCTGACGAGTTCG 253743 Query 2053 GTAACACATTTTCCGTTCCAGATCCATTGCGCGAGGTTCAGCGGTTAGGAACAAAGAAAA 2112 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 253742 GTAATACATTTTCCGTTCCAGATCCATTGCGTGAGGTTCAGCGGTTAGGAACAAAGAAAA 253683 Query 2113 TTCCCTATTCTGACAATGATGAATTCTTGTTTGCTCACTTCATGAGCTTTGTTGATCGAT 2172 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 253682 TTCCCTATTCTGACAATGATGAATTCTTGTTTGCTCACTTCATGAGTTTTGTTGATCGAT 253623 Query 2173 TGAAGTTTTTGGACCGAATGTCTCAGTCGTGTATCGATCAACTTTCGATTTTCTTCGAAT 2232 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| || | Sbjct 253622 TGAAATTTTTAGACCGAATGTCTCAGTCGTGTATCGATCAACTTTCTCTTTTCTTTGAGT 253563 Query 2233 TGAAATACAAGAAGTCTGGGGAAGAGGCTGCTTTAATGTTAGGCGCCTTTAAGAAGTATA 2292 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 253562 TGAAATACAAGAAGTCTGGGGAAGAGGCTGCTTTAATGTTAGGAGCCTTTAAGAAATATA 253503 Query 2293 CCGCTAATTTCCAGTCCTACAAAGAACTCTATTATTCAGATCGTCGTCAGTGCGAATTGA 2352 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 253502 CCGCTAATTTCCAGTCCTACAAAGAACTTTATTATTCAGATCGTCGTCAGTGCGAATTGA 253443 Query 2353 TCAATTCGTTTTGTAGTACAGAGTTCAGGGTTGAGCGTGTAAATTC 2398 |||||||||||||| |||| ||||| ||| ||||||| |||||| Sbjct 253442 TCAATTCGTTTTGTTGTACTGAGTTTAGGACTGAGCGTTCAAATTC 253397 Score = 663 bits (734), Expect = 0.0 Identities = 396/415 (95%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 1870 GGTGTTATGACACCGACCAATTCGAAAAGCTTTTATTCTCAGGCGATGATTCTCTAGGAT 1929 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 254457 GGTGTTACGATACCGACCAATTCGAAAAGCTTTTATTCTCAGGCGATGATTCTCTAGGAT 254516 Query 1930 TTTCACTGCTTCCCCCTGTTGGTGACCCGAGTAAATTCACAACTCTTTTCAACATGGAAG 1989 ||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||||| Sbjct 254517 TTTCAGTGCTTCCCCCTGTTGGTGATCCGAGTAAATTCACAACTCTCTTTAACATGGAAG 254576 Query 1990 CTAAGGTGATGGAACCTGCCGTACCATATATTTGTTCGAAGTTCTTACTCTCTGACGAGT 2049 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 254577 CCAAGGTGATGGAACCTGCAGTGCCATATATTTGTTCGAAGTTCTTACTCTCTGACGAGT 254636 Query 2050 TCGGTAACACATTTTCCGTTCCAGATCCATTGCGCGAGGTTCAGCGGTTAGGAACAAAGA 2109 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 254637 TCGGTAATACATTTTCCGTTCCAGATCCATTGCGTGAGGTTCAGCGGTTAGGAACAAAGA 254696 Query 2110 AAATTCCCTATTCTGACAATGATGAATTCTTGTTTGCTCACTTCATGAGCTTTGTTGATC 2169 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 254697 AAATTCCCTATTCTGACAATGATGAATTCTTGTTTGCTCACTTCATGAGTTTTGTTGATC 254756 Query 2170 GATTGAAGTTTTTGGACCGAATGTCTCAGTCGTGTATCGATCAACTTTCGATTTTCTTCG 2229 ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 254757 GATTGAAATTTTTAGACCGAATGTCTCAGTCGTGTATCGATCAACTTTCTCTTTTCTTTG 254816 Query 2230 AATTGAAATACAAGAAGTCTGGGGAAGAGGCTGCTTTAATGTTAGGCGCCTTTAA 2284 | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 254817 AGTTGAAATACAAGAAGTCTGGGGAAGAGGCTGCTTTAATGTTAGGAGCCTTTAA 254871 Score = 637 bits (706), Expect = 9e-180 Identities = 383/403 (95%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 1094 ACCGGTTCTGAACACCGGGAGCGGTCACAAGAGAGTAGGTACAACGAAGGAGGTCCTTAC 1153 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 254459 ACCGGTTTTGAATACCGGGAGCGGTCACAAGAGAGTAGGTACAACGAAGGAGGTCCTTAC 254400 Query 1154 AGCAATTAAGAAACGTAATGCTGACGTTCCAGAGCTAGGTGATTCCGTTAATTTGTCTAG 1213 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 254399 AGCAATTAAGAAACGTAATGCTGACGTTCCAGAGCTAGGTGATTCCGTTAATCTGTCCAG 254340 Query 1214 ATTGAGTAAAGCTGTGGCTGAGAGATTCTTCATTTCATACATCAATGGTAACTCTCTAGC 1273 |||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| || Sbjct 254339 GTTGAGTAAGGCTGTGGCTGAGAGATTTTTCATTTCGTATATCAATGGTAACTCTCTGGC 254280 Query 1274 ATCCAGTAACTTTGTCAATGTCGTTAGTAACTTCCACGATTACATGGAAAAATGGAAGTC 1333 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 254279 ATCCAGTAATTTTGTCAATGTCGTTAGCAACTTCCACGATTACATGGAAAAATGGAAGTC 254220 Query 1334 CTCAGGTCTTTCTTATGATGATCTTCCGGATCTTCATGCTGAGAATTTGCAGTTTTATGA 1393 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 254219 TTCAGGTCTTTCGTATGACGATCTTCCAGATCTTCATGCTGAGAATTTGCAGTTTTATGA 254160 Query 1394 CCACATGATAAAATCCGATGTGAAACCTGTGGTGAGCGACACACTCAATATCGACAGACC 1453 |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct 254159 TCACATGATAAAATCTGATGTGAAACCTGTTGTGAGCGACACACTCAATATTGACAGACC 254100 Query 1454 GGTTCCAGCTACTATAACGTATCATAAGAAGAGTATAACCTCC 1496 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 254099 GGTTCCAGCTACTATAACGTATCATAAGAAGAGTATAACCTCC 254057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9644056003125