Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_002358.1 Length=7111 Score E Sequences producing significant alignments: (Bits) Value seq9 109 2e-20 seq37044 104 1e-18 >seq9 Length=31747250 Score = 109 bits (120), Expect = 2e-20 Identities = 109/140 (78%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 3478 TGCATTTTGATGAGGCACTGATGGCACATGCTGGGATGGTGTACTTCTGCGCTGATCTGT 3537 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct 956978 TGCATTTTGATGAGGCGTTGATGGCTCATGCTGGTATGGTATACTTTTGCGCAGACATGT 956919 Query 3538 TGGGTGCGAAGAAGGTTATCTGTCAAGGTGATTCACAGCAGATTCCCTTTGTGAACAGGG 3597 || ||| | || || || || ||||| ||||| || |||||||||||||| |||| Sbjct 956918 TGTCTGCTCGAATTGTGATTTGCCAGGGTGACTCACAACAAATTCCCTTTGTGAATAGGG 956859 Query 3598 TCGAATCTATATCACTTCAG 3617 | ||| | || | |||| || Sbjct 956858 TAGAAGCGAT-TGACTTGAG 956840 >seq37044 Length=2975 Score = 104 bits (114), Expect = 1e-18 Identities = 108/139 (78%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 3465 AGGGCCAGCGTCGTGCATTTTGATGAGGCACTGATGGCACATGCTGGGATGGTGTACTTC 3524 || || ||||| | || ||||||||||| ||||||| || ||||| ||||| || || Sbjct 261 AGAGCTAGCGTGCTACACTTTGATGAGGCGTTGATGGCTCACGCTGGTATGGTCTATTTT 202 Query 3525 TGCGCTGATCTGTTGGGTGCGAAGAAG-GTTATCTGTCAAGGTGATTCACAGCAGATTCC 3583 ||||| ||| ||||| |||| |||| || |||||||| ||||| || || || || || Sbjct 201 TGCGCGGATATGTTGTCTGCG-CGAAGTGTGATCTGTCAGGGTGACTCGCAACAAATCCC 143 Query 3584 CTTTGTGAACAGGGTCGAA 3602 |||||| ||||| || ||| Sbjct 142 CTTTGTAAACAGAGTAGAA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22630480587500