Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003512.1 Length=2529 Score E Sequences producing significant alignments: (Bits) Value seq10 122 1e-24 >seq10 Length=40424437 Score = 122 bits (134), Expect = 1e-24 Identities = 210/301 (70%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 1535 ACCAGCCTAAGACATATCGTTATGGTAAGGAGTAACGTGGTTGGTGCGCGTCCAAACATC 1594 ||||||| || || ||||||||| | ||||||| | |||| || ||||| | Sbjct 20602938 ACCAGCC----ACGTACCGTTATGGTCCGCAGTAACGAGATTGGGAATCGCCCAAATAAA 20602883 Query 1595 TATTGGCCCATTGTGGTTGGTGTTGTTGCTAT--TGCTTTATTCGGTTTTCTCACTATAA 1652 |||||||| || || | ||| | | | || || || ||| || | | || | | Sbjct 20602882 TATTGGCCTATAGTCGCGGGTATAGCAG-TAGCGTGTTTGTTTCTATTCT-TGACCTTTA 20602825 Query 1653 CCAATCAGAAACATTCTACTCAGTCTGGTGATAATATACATAAGTTTGCCAACGGCGGTA 1712 |||| |||||||| | |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct 20602824 CCAACCAGAAACACGCGACTCAGTCAGGTGACAATATTCATAAGTTTGCAAACGGTGGGT 20602765 Query 1713 GTTACGCCGACGGTTCCAAACGTATAAATTATAATAAGAATAATTGTAGAGCCTATAATG 1772 ||| ||||| ||| | ||| || ||||||||||| | ||| ||| | | Sbjct 20602764 CTTATCAGGACGGGAGTAAAAGAATACTGTACAATAAGAATAACGCTTTAGCATATGACG 20602705 Query 1773 GATCCTCCAGTAATAGAACATTCACAGGATTGCTGTTGCCAGCATTGTTCTTGGCAGCCG 1832 |||| ||||| |||||||||||| | |||||| | ||| | ||||| |||| |||| Sbjct 20602704 GATCATCCAGCAATAGAACATTCTCCGGATTGTGGGTGCTCGGATTGTGTTTGGTCGCCG 20602645 Query 1833 C 1833 | Sbjct 20602644 C 20602644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7980829478750