Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003519.1 Length=3005 Score E Sequences producing significant alignments: (Bits) Value seq10 127 4e-26 >seq10 Length=40424437 Score = 127 bits (140), Expect = 4e-26 Identities = 197/280 (70%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 1669 ACCATTATGGTAAGAACTAATGAGATCGGCGCCAGACCTAATAAGTATTGGCCAATAGTC 1728 ||| ||||||| | | ||| ||||| || | || ||||| |||||||| |||||| Sbjct 20602927 ACCGTTATGGTCCGCAGTAACGAGATTGGGAATCGCCCAAATAAATATTGGCCTATAGTC 20602868 Query 1729 GTGGGTGTATTTGCAATTGCAT---TGTTCAGTTTTTTAACTATAACTAATCAGAAACAC 1785 | |||| || ||| | || | |||| || || || | || || ||||||||| Sbjct 20602867 GCGGGTATA---GCAGTAGCGTGTTTGTTTCTATTCTTGACCTTTACCAACCAGAAACAC 20602811 Query 1786 GCCACAGAGTCGGGAGATAATATCCACAAGTTTTCTAACGGTGGAAAATTTCAAGACGGC 1845 || || |||| || || ||||| || |||||| | |||||||| | ||| ||||| Sbjct 20602810 GCGACTCAGTCAGGTGACAATATTCATAAGTTTGCAAACGGTGGGTCTTATCAGGACGGG 20602751 Query 1846 AATAAGCGTGTTCATTATAATAAGAATAATCCTAGAGCTTATAATGGATCCTCCAGCAAT 1905 | ||| | | | || ||||||||||| || ||| ||| | ||||| ||||||||| Sbjct 20602750 AGTAAAAGAATACTGTACAATAAGAATAACGCTTTAGCATATGACGGATCATCCAGCAAT 20602691 Query 1906 AATACATTCTCAAAACTGTTGTTGCCCGGATTGTTCTTGG 1945 | |||||||| | ||| | ||| |||||||| |||| Sbjct 20602690 AGAACATTCTCCGGATTGTGGGTGCTCGGATTGTGTTTGG 20602651 Score = 104 bits (114), Expect = 4e-19 Identities = 280/414 (68%), Gaps = 17/414 (4%) Strand=Plus/Minus Query 936 ACCGGCGTACCTGGTAGTGGAAAAACCACTTTGCTTAGAAAAATTCAAACCGAAGCA-GG 994 || || ||||| |||||||| || | || ||||||| |||||||||| | || | || Sbjct 20603666 ACTGGTGTACCGGGTAGTGGTAAGAGTACGTTGCTTAAGAAAATTCAAA--GTAGTAAGG 20603609 Query 995 T-TTGAACTCCGTTGTTATATTGGCCAACGAGCGTCACAAAATACGTTTTACACAGTTGC 1053 | || || || |||| | ||| |||||| ||||||| | | || ||| | | Sbjct 20603608 TGTTTAATTCTTGTGTTGTGTTGTGTAACGAGACTCACAAAGTCTCATATAATCAGATTC 20603549 Query 1054 CAGCTTGTTATACAGCTAAAGAAATATTGTTG-TTGAGAACGGCGAT-TAAG-TACGACG 1110 | ||| ||| || || ||||| ||| |||| || ||| | || | || | ||||| Sbjct 20603548 CTGCTACTTACACTGCGAAAGAGATACTGTTACTTCCTTACGACCATATCAGATTCGACG 20603489 Query 1111 TTTTGTTAATAGACGAGTATACGTTATTGCAGAACGGC-GAAATTTTGTTACTGCAACGT 1169 | ||||| ||||||||||||||||| | || ||| || || ||||| | || ||| Sbjct 20603488 TGTTGTTTGTAGACGAGTATACGTTAGT-CACTGCGGGAGAGATCTTGTTGTTACAGCGT 20603430 Query 1170 ATACTAGAAGCGAAAGTAGTGGTGCTATTTGGTGACAGAGCGCAAGGCAACTCCCG-TAC 1228 | ||| | || ||| | || || | ||||||||||| ||||| || | | || Sbjct 20603429 AAACTTGGTGCAAAAATTGTTGTTGTTTTTGGTGACAGGAGTCAAGG-AAGTAGTGCTAA 20603371 Query 1229 TGCGGATAGTCCAGAGTGGTTGCAGATTCCAGTTATTTACTCTTCTGTTAAGAGTAGACG 1288 || | ||||| ||||||||| |||||||| | || | |||| || ||| | Sbjct 20603370 CGCAGGAAGTCCGGAGTGGTTGGTATTTCCAGTTGTGTATTGTTCTACAAATAGTTATAG 20603311 Query 1289 TTTTGGAAAGGCCACCGCGGATTTTTGCGGTAA---ACAGGGTTTTGATTTTGA 1339 | ||| ||||| || || | |||| |||| ||||| |||||||||| Sbjct 20603310 GTGTGGTAAGGCTACAGCTAAATTTT---GTAAGTGTCAGGGGATTGATTTTGA 20603260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9500114868750