Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_003725.1 Length=2964 Score E Sequences producing significant alignments: (Bits) Value seq10 129 1e-26 >seq10 Length=40424437 Score = 129 bits (142), Expect = 1e-26 Identities = 179/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 1747 TATGGTCCGGAATAACGAAATTGGAGCGCGACCAAATAAATATTGGCCGGTAGTTGCGGC 1806 ||||||||| | |||||| ||||| || ||||||||||||||||| |||| |||| Sbjct 20602922 TATGGTCCGCAGTAACGAGATTGGGAATCGCCCAAATAAATATTGGCCTATAGTCGCGGG 20602863 Query 1807 AGTAGTTGCAATTTGTCTTTTCGGTTTTTTAACAGTTACCAATCAAAAACACGCTACTCA 1866 ||| | | ||| | || || || || ||||||| || |||||||| ||||| Sbjct 20602862 TATAGCAGTAGCGTGTTTGTTTCTATTCTTGACCTTTACCAACCAGAAACACGCGACTCA 20602803 Query 1867 ATCAGGAGATAATATACATAAATTTGCTAACGGTGGCCAGTACAGGGACGGTTCTAAGAG 1926 ||||| || ||||| ||||| ||||| |||||||| || |||||| ||| || Sbjct 20602802 GTCAGGTGACAATATTCATAAGTTTGCAAACGGTGGGTCTTATCAGGACGGGAGTAAAAG 20602743 Query 1927 TATTAAGTATAATTGTAATAATCCCAGAGCTTATAATGGATCCTCCAGTAATATTACATT 1986 || ||| ||| ||||| | ||| ||| | ||||| ||||| |||| ||||| Sbjct 20602742 AATACTGTACAATAAGAATAACGCTTTAGCATATGACGGATCATCCAGCAATAGAACATT 20602683 Query 1987 CTCCCAATTGT 1997 |||| ||||| Sbjct 20602682 CTCCGGATTGT 20602672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9368968501875