Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_004730.1 Length=4507 Score E Sequences producing significant alignments: (Bits) Value seq10 80.6 8e-12 >seq10 Length=40424437 Score = 80.6 bits (88), Expect = 8e-12 Identities = 137/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 3625 TTTATTTGTCTTTCTGTCCGTATCCAATCAAAAGCACTCAACAACTTCTGGTGATAATAT 3684 ||| ||| | || || || | |||| || || ||| | || || ||||| ||||| Sbjct 20602847 TTTGTTTCTATTCTTGACCTTTACCAACCAGAAACACGCGACTCAGTCAGGTGACAATAT 20602788 Query 3685 ACATAAGTATGCAAACGGAGGTACTTACCGTGACGGTTCTAAGTGTATTTCTTACAATAA 3744 ||||||| ||||||||| || |||| | ||||| ||| | || |||||||| Sbjct 20602787 TCATAAGTTTGCAAACGGTGGGTCTTATCAGGACGGGAGTAAAAGAATACTGTACAATAA 20602728 Query 3745 GAACTCTCCTCTAGCGTATAATGGAAGCTCCAGCAATAACACACTCTTCTGGTTGTGCCT 3804 ||| || |||| ||| | ||| |||||||||| ||| ||| | | ||||| | Sbjct 20602727 GAATAACGCTTTAGCATATGACGGATCATCCAGCAATAGAACATTCTCCGGATTGTGGGT 20602668 Query 3805 GCTCGGACTGTCAATGGTC 3823 ||||||| ||| ||||| Sbjct 20602667 GCTCGGATTGTGTTTGGTC 20602649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14304550065000