Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq10 102 5e-18 seq394 98.7 6e-17 seq50 96.9 2e-16 seq9 96.9 2e-16 seq5 96.9 2e-16 seq117 95.1 7e-16 seq2 87.8 1e-13 >seq10 Length=40424437 Score = 102 bits (112), Expect = 5e-18 Identities = 63/65 (97%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 8801006 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 8800947 Query 8909 GCTCT 8913 ||||| Sbjct 8800946 GCTCT 8800942 >seq394 Length=113063 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5680 GCCCGCGTTGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAGTCGGGGTTTGTTGCAC 5621 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 5620 GTATTAGCTCT 5610 >seq50 Length=345246 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 7352 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 7293 Query 8909 GCTCT 8913 ||||| Sbjct 7292 GCTCT 7288 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct 1933 GTCGACCTTTTATCTAATAAATGCATCCCATCCAGAAGTCGGGGTTTGTTGCATGTATTA 1874 Query 8909 GCTCT 8913 ||||| Sbjct 1873 GCTCT 1869 >seq9 Length=31747250 Score = 96.9 bits (106), Expect = 2e-16 Identities = 60/62 (97%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 25143891 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 25143832 Query 8912 CT 8913 || Sbjct 25143831 CT 25143830 Score = 93.3 bits (102), Expect = 2e-15 Identities = 61/65 (94%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 7336994 GTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTTGTTGCACGTATTA 7336935 Query 8909 GCTCT 8913 ||||| Sbjct 7336934 GCTCT 7336930 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct 25173921 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCAGGGTTTGTTGCACGTATTA 25173862 Query 8909 GCTCT 8913 ||||| Sbjct 25173861 GCTCT 25173857 >seq5 Length=30687117 Score = 96.9 bits (106), Expect = 2e-16 Identities = 60/62 (97%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 12137670 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 12137611 Query 8912 CT 8913 || Sbjct 12137610 CT 12137609 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| Sbjct 12077390 GTCGACCTTTTATCTAATAAATGCCTCCCTTCCAGAAGCCGGGGTTTGTTGCACGTATTA 12077331 Query 8909 GCTCT 8913 ||||| Sbjct 12077330 GCTCT 12077326 >seq117 Length=346859 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 156473 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAT 156414 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 156413 GTATTAGCTCT 156403 Score = 84.2 bits (92), Expect = 1e-12 Identities = 59/65 (91%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||| Sbjct 262286 GTCGACCTTTTATCTAACAAATGCATCCCTTCTAGAAGTTGGGGTTTGTTGCACGTATTA 262345 Query 8909 GCTCT 8913 ||||| Sbjct 262346 GCTCT 262350 >seq2 Length=35625406 Score = 87.8 bits (96), Expect = 1e-13 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| ||| Sbjct 9191184 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGCTTTGTTGTACGTATTAGCT 9191125 Query 8912 CT 8913 || Sbjct 9191124 CT 9191123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28394455996500