Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq2499 105 3e-19 seq589 91.5 6e-15 >seq2499 Length=151271 Score = 105 bits (116), Expect = 3e-19 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | |||||| | | |||||||| | |||||||| | Sbjct 71093 TTTATGATACTATGCAATTTGTACAACCAGATGTACAGACAGTATGTCTGGGATTAGCTG 71034 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||| || | ||| ||||| ||||||||||||||| ||||| || Sbjct 71033 CTTCAATGGGATCCTTTCTTTTGGCAGGAGGCACAATTACCAAACGTCTTGCATTTCC 70976 >seq589 Length=227360 Score = 91.5 bits (100), Expect = 6e-15 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | |||||| | ||| |||| | |||||| | | Sbjct 181168 TTTATGATACTATGCAATTTGTACAACCAGATGTATCGACAATATGTATGGGATTAACTG 181109 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATT 116 |||| ||||||||| || | |||| ||||| ||||||||||||||| | ||| Sbjct 181108 CTTCCATGGGATCTTTTCTTTTGGTTGGAGGCACAATTACCAAACGTCTTGTATT 181054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045879408320