Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_015782.1 Length=7275 Score E Sequences producing significant alignments: (Bits) Value seq371635 95.1 6e-16 seq578876 78.8 4e-11 >seq371635 Length=212 Score = 95.1 bits (104), Expect = 6e-16 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 101 TTCGGTTATATAACTTCACAGCCATCACTAATCCCCTACACAAAATGCGAGTTTTACACA 160 || ||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 161 TTGGGTTATATAACTTCACAGCCATCACTAATCCCCTACACAAAATGCGAGTTTCATTCA 102 Query 161 CAAATAT 167 ||| || Sbjct 101 AAAAGAT 95 >seq578876 Length=289 Score = 78.8 bits (86), Expect = 4e-11 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 105 GTTATATAACTTCACAGCCATCACTAATCCCCTACACAAAATGCGAGT 152 ||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 234 GTTATATAACTTCACAGCCATTACTAATCCCCTACACAAAATGCAAGT 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22967750800500