Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq3129 145 3e-31 seq2846 145 3e-31 seq13 145 3e-31 seq4 145 3e-31 seq201 136 2e-28 >seq3129 Length=159636 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | |||| ||||| | || ||||||| Sbjct 74321 TTTATGATACTATGCAATTTGTGCCACCTGATGTGCATACAATATGCATGGGGTTAGCCG 74262 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct 74261 CGTCAATGGGATCTTTTATTCTGGTCGGAGGAGAAATTACCAAACGTATAGCATTCCC 74204 >seq2846 Length=124294 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | |||| ||||| | || ||||||| Sbjct 18642 TTTATGATACTATGCAATTTGTGCCACCTGATGTGCATACAATATGCATGGGGTTAGCCG 18701 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct 18702 CGTCAATGGGATCTTTTATTCTGGTCGGAGGAGAAATTACCAAACGTATAGCATTCCC 18759 >seq13 Length=11759267 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | |||| ||||| | |||||||||| Sbjct 6572554 TTTATGATACTATGCAATTTGTGCCACCTGATGTGCATACAATATGCATGGGATTAGCCG 6572613 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 6572614 TGTCAATGGGATCTTTTATTCTGGTTGGAGGAGAAATTACCAAACGTCTAGCATTCCC 6572671 >seq4 Length=15584765 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | |||| ||||| | || ||||||| Sbjct 15014977 TTTATGATACTATGCAATTTGTGCCACCTGATGTGCATACAATATGCATGGGGTTAGCCG 15014918 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct 15014917 CGTCAATGGGATCTTTTATTCTGGTCGGAGGAGAAATTACCAAACGTATAGCATTCCC 15014860 >seq201 Length=39725 Score = 136 bits (150), Expect = 2e-28 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | |||||| | | ||| ||||| | ||||| |||| Sbjct 263 TTTATGATACTATGCAATTTGTACAACCAGATGTACAGACAATATGCATGGGATTGGCCG 204 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| |||||| || | |||||||| ||||||||||||||||||||||||||||| Sbjct 203 CTTCAATAGGATCTTTTCTTCTGGTCGGGGGAGAAATTACCAAACGTCTAGCATTCCC 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045748166720