Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 1e-23
seq9 109 2e-20
>seq7
Length=151357931
Score = 120 bits (132), Expect = 1e-23
Identities = 75/81 (93%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 39 TACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAAT 98
|||| ||||| | |||||||||||||||||||||||| | || |||||||||||||||||
Sbjct 16626764 TACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAAT 16626823
Query 99 TACCAAACGTCTAGCATTCCC 119
|||||||||||||||||||||
Sbjct 16626824 TACCAAACGTCTAGCATTCCC 16626844
>seq9
Length=68543460
Score = 109 bits (120), Expect = 2e-20
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||| |||| |||| |||| || || | | |||| || | ||||||||||
Sbjct 61243415 TTTATGACACTACGCAATTTGTTTCGCCTGATGTACATACAATACACATAGGATTAGCTA 61243474
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||||
Sbjct 61243475 CTTCAATGGGATCTTTCATTCTGGTTGGAGGAGAAATTACCAAGCGTCTAGCATTCCC 61243532
Score = 93.3 bits (102), Expect = 2e-15
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 44 TATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCA 103
||||| | |||||||| ||||||||||||||| | || |||||| || || |||||||||
Sbjct 9262107 TATGCATGGGATTAGCTGCTTCAATGGGATCT-TCATTCTGGTCAGAAGAAAAATTACCA 9262165
Query 104 AACGTCTAGCATTCCC 119
||||||||||||||||
Sbjct 9262166 AACGTCTAGCATTCCC 9262181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19043943490560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |