Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq8 86.0 4e-13
seq5 86.0 4e-13
seq4 86.0 4e-13
seq1364 80.6 2e-11
seq607 80.6 2e-11
seq10 80.6 2e-11
>seq8
Length=131339754
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| ||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 92223793 GCCCGTGTTGTCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 92223852
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 92223853 GTATTAGCTCT 92223863
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| ||||||||| ||| ||| ||
Sbjct 96263476 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGTTTTTTTGAAC 96263417
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 96263416 GTATTAGCTCT 96263406
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 96273704 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96273645
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 96273644 GTATTAGCTCT 96273634
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 96277806 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96277865
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 96277866 GTATTAGCTCT 96277876
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 96794744 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96794685
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 96794684 GTATTAGCTCT 96794674
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 96815002 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96814943
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 96814942 GTATTAGCTCT 96814932
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 99781490 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 99781549
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 99781550 GTATTAGCTCT 99781560
Score = 78.8 bits (86), Expect = 5e-11
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| ||||||||| ||| ||| ||
Sbjct 96263546 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGTTTTTTTGAAC 96263487
Query 8905 G 8905
|
Sbjct 96263486 G 96263486
>seq5
Length=131469567
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct 98546346 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGCTTTTTGCAC 98546405
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 98546406 GTATTAGCTCT 98546416
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 88576886 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 88576827
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 88576826 GTATTAGCTCT 88576816
>seq4
Length=146560859
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 75378253 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGATTTTTTTGCAC 75378312
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 75378313 GTATTAGCTCT 75378323
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 66297194 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 66297253
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 66297254 GTATTAGCTCT 66297264
>seq1364
Length=14391
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 8202 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 8143
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 8142 GTATTAGCTCT 8132
>seq607
Length=27111
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 1891 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 1832
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 1831 GTATTAGCTCT 1821
>seq10
Length=73452336
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 62141378 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 62141437
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 62141438 GTATTAGCTCT 62141448
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 62150838 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 62150897
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 62150898 GTATTAGCTCT 62150908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28402631606976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |