Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 4e-13 seq5 86.0 4e-13 seq4 86.0 4e-13 seq1364 80.6 2e-11 seq607 80.6 2e-11 seq10 80.6 2e-11 >seq8 Length=131339754 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 92223793 GCCCGTGTTGTCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 92223852 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 92223853 GTATTAGCTCT 92223863 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| ||||||||| ||| ||| || Sbjct 96263476 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGTTTTTTTGAAC 96263417 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 96263416 GTATTAGCTCT 96263406 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 96273704 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96273645 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 96273644 GTATTAGCTCT 96273634 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 96277806 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96277865 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 96277866 GTATTAGCTCT 96277876 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 96794744 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96794685 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 96794684 GTATTAGCTCT 96794674 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 96815002 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 96814943 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 96814942 GTATTAGCTCT 96814932 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 99781490 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 99781549 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 99781550 GTATTAGCTCT 99781560 Score = 78.8 bits (86), Expect = 5e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| ||||||||| ||| ||| || Sbjct 96263546 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGTTTTTTTGAAC 96263487 Query 8905 G 8905 | Sbjct 96263486 G 96263486 >seq5 Length=131469567 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||||| || |||||| Sbjct 98546346 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGCTTTTTGCAC 98546405 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 98546406 GTATTAGCTCT 98546416 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 88576886 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 88576827 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 88576826 GTATTAGCTCT 88576816 >seq4 Length=146560859 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| ||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 75378253 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGATTTTTTTGCAC 75378312 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 75378313 GTATTAGCTCT 75378323 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 66297194 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 66297253 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 66297254 GTATTAGCTCT 66297264 >seq1364 Length=14391 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 8202 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 8143 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 8142 GTATTAGCTCT 8132 >seq607 Length=27111 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 1891 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 1832 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1831 GTATTAGCTCT 1821 >seq10 Length=73452336 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 62141378 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 62141437 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 62141438 GTATTAGCTCT 62141448 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||| |||||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct 62150838 GCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCAC 62150897 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 62150898 GTATTAGCTCT 62150908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28402631606976