Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq297 145 3e-31 seq1726 93.3 2e-15 >seq297 Length=119073 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | |||| ||||| | |||||||||| Sbjct 39444 TTTATGATACTATGCAATTTGTACCACCCGATGTGCATACAATATGCATGGGATTAGCCG 39385 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct 39384 CTTCAATGGGATCTTTCATTTTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 39327 >seq1726 Length=51375 Score = 93.3 bits (102), Expect = 2e-15 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||| ||||||||||| |||| | ||| || | | |||| ||||| | ||||||||| Sbjct 35132 TTTAATATACTATGCAACTTGTACCACCCGATGTGCATACAATATGCATGGGATTAGCCA 35191 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117 |||||||| ||| | || |||||| |||||||| |||| ||| | |||||||| Sbjct 35192 CTTCAATGAGATACTTCATTTTGGTCGAAGGAGAAAATACCTAACATTTAGCATTC 35247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19038007620480