Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq297 145 3e-31
seq1726 93.3 2e-15
>seq297
Length=119073
Score = 145 bits (160), Expect = 3e-31
Identities = 103/118 (87%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||| | ||| || | | |||| ||||| | ||||||||||
Sbjct 39444 TTTATGATACTATGCAATTTGTACCACCCGATGTGCATACAATATGCATGGGATTAGCCG 39385
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct 39384 CTTCAATGGGATCTTTCATTTTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 39327
>seq1726
Length=51375
Score = 93.3 bits (102), Expect = 2e-15
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
|||| ||||||||||| |||| | ||| || | | |||| ||||| | |||||||||
Sbjct 35132 TTTAATATACTATGCAACTTGTACCACCCGATGTGCATACAATATGCATGGGATTAGCCA 35191
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTC 117
|||||||| ||| | || |||||| |||||||| |||| ||| | ||||||||
Sbjct 35192 CTTCAATGAGATACTTCATTTTGGTCGAAGGAGAAAATACCTAACATTTAGCATTC 35247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19038007620480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |