Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq4678 87.8 1e-13 seq4275 87.8 1e-13 seq3867 87.8 1e-13 seq10 87.8 1e-13 >seq4678 Length=16778 Score = 87.8 bits (96), Expect = 1e-13 Identities = 57/60 (95%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| Sbjct 13375 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 13316 >seq4275 Length=21226 Score = 87.8 bits (96), Expect = 1e-13 Identities = 57/60 (95%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| Sbjct 15317 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 15376 >seq3867 Length=26241 Score = 87.8 bits (96), Expect = 1e-13 Identities = 57/60 (95%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| Sbjct 22232 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 22291 >seq10 Length=33665772 Score = 87.8 bits (96), Expect = 1e-13 Identities = 57/60 (95%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| Sbjct 6135086 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 6135145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28404080226852