Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq6361 84.2 1e-12 seq3967 84.2 1e-12 seq3436 84.2 1e-12 seq825 84.2 1e-12 seq747 84.2 1e-12 seq724 84.2 1e-12 seq616 84.2 1e-12 seq589 84.2 1e-12 seq357 84.2 1e-12 seq150 84.2 1e-12 seq124 84.2 1e-12 seq80 84.2 1e-12 seq21 84.2 1e-12 seq1810 80.6 2e-11 seq6063 78.8 5e-11 seq596 78.8 5e-11 >seq6361 Length=3276 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||| Sbjct 1600 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCAGGGTTTGTTGCACGTATTAGCTCT 1659 >seq3967 Length=15081 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||| Sbjct 11072 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCAGGGTTTGTTGCACGTATTAGCTCT 11013 >seq3436 Length=20345 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||| Sbjct 1388 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCAGGGTTTGTTGCACGTATTAGCTCT 1447 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 4122 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 4181 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 12571 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 12630 >seq825 Length=136628 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 89686 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 89627 >seq747 Length=150269 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 101380 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 101321 >seq724 Length=154638 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 89081 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 89022 >seq616 Length=177237 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 50687 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 50746 >seq589 Length=186043 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 98621 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 98562 >seq357 Length=281501 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 63349 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 63408 >seq150 Length=478668 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 211319 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 211260 >seq124 Length=522229 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 216914 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 216855 >seq80 Length=615811 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 350534 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 350475 >seq21 Length=982915 Score = 84.2 bits (92), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||| Sbjct 970535 CCTTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGTACGTATTAGCTCT 970476 >seq1810 Length=55853 Score = 80.6 bits (88), Expect = 2e-11 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 8858 TTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||| Sbjct 9277 TTTTATCTAATAAATGCATCCCTTCCGGAAGTCGGGGTTTGTTGCATGTATTAGCTCT 9334 >seq6063 Length=4722 Score = 78.8 bits (86), Expect = 5e-11 Identities = 55/60 (92%), Gaps = 2/60 (3%) Strand=Plus/Minus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||| Sbjct 2120 CCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCAGGGTTTGTTGCACGTATTAGCTCT 2061 >seq596 Length=183969 Score = 78.8 bits (86), Expect = 5e-11 Identities = 55/60 (92%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 8856 CCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||| Sbjct 36134 CCTTTTATCTAATAAATGAATCCCTTCCGAAAGTCGGGGTTTGTTGCACGTATTAGCTCT 36193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28397319361620