Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 154 6e-34
seq1242 154 6e-34
seq2 154 6e-34
seq54 140 1e-29
seq121 96.9 1e-16
seq1261 87.8 7e-14
seq1309 80.6 1e-11
>seq89584
Length=148959
Score = 154 bits (170), Expect = 6e-34
Identities = 105/118 (89%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| ||||| ||||||| | | |||| |||| | ||||||||||
Sbjct 72107 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 72048
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 72047 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 71990
>seq1242
Length=263115
Score = 154 bits (170), Expect = 6e-34
Identities = 105/118 (89%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| ||||| ||||||| | | |||| |||| | ||||||||||
Sbjct 112218 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 112277
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 112278 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 112335
>seq2
Length=81761211
Score = 154 bits (170), Expect = 6e-34
Identities = 105/118 (89%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| ||||| ||||||| | | |||| |||| | ||||||||||
Sbjct 24185898 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 24185957
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 24185958 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 24186015
Score = 154 bits (170), Expect = 6e-34
Identities = 105/118 (89%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| ||||| ||||||| | | |||| |||| | ||||||||||
Sbjct 42675899 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 42675840
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 42675839 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 42675782
>seq54
Length=3706658
Score = 140 bits (154), Expect = 1e-29
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 3 TTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGC 62
|||||||| ||||||| ||||| ||||||| | | |||| |||| | |||||||||||
Sbjct 1746861 TTATGATAGTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCGC 1746920
Query 63 TTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||||||||| | || ||||||||||||||||||| ||||||| ||||||||||
Sbjct 1746921 TTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTATCAAACGTGTAGCATTCCC 1746977
>seq121
Length=1471777
Score = 96.9 bits (106), Expect = 1e-16
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 52 GGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTA 111
|||||||||| ||||||| ||||| | || ||||||||||||||||||||||||||||||
Sbjct 925966 GGATTAGCCGTTTCAATGAGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTA 926025
Query 112 GCATTCCC 119
||||| ||
Sbjct 926026 GCATTTCC 926033
>seq1261
Length=20693
Score = 87.8 bits (96), Expect = 7e-14
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 44 TATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCA 103
|||| | |||||||| |||||||||| |||| | || ||||||| ||||||||||||||
Sbjct 3889 TATGTATGGGATTAGCTGCTTCAATGGAATCTTTCATTCTGGTCGAAGGAGAAATTACCA 3948
Query 104 AACGTCTAGCATTCCC 119
|| ||| |||||||||
Sbjct 3949 AATGTCCAGCATTCCC 3964
>seq1309
Length=319573
Score = 80.6 bits (88), Expect = 1e-11
Identities = 73/92 (79%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||| ||||||||| ||||| ||| || | | |||| |||| | ||||||||||
Sbjct 41072 TTTATGAGACTATGCAATTTGTGTCACCGGATGTACATACAATATGTATGGGATTAGCCG 41131
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGA 93
|||||||||||| | || |||| |||||||
Sbjct 41132 GCTCAATGGGATCTTTCATTCTGGGCGGAGGA 41163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19027737861120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |