Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq89584 154 6e-34 seq1242 154 6e-34 seq2 154 6e-34 seq54 140 1e-29 seq121 96.9 1e-16 seq1261 87.8 7e-14 seq1309 80.6 1e-11 >seq89584 Length=148959 Score = 154 bits (170), Expect = 6e-34 Identities = 105/118 (89%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| ||||| ||||||| | | |||| |||| | |||||||||| Sbjct 72107 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 72048 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 72047 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 71990 >seq1242 Length=263115 Score = 154 bits (170), Expect = 6e-34 Identities = 105/118 (89%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| ||||| ||||||| | | |||| |||| | |||||||||| Sbjct 112218 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 112277 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 112278 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 112335 >seq2 Length=81761211 Score = 154 bits (170), Expect = 6e-34 Identities = 105/118 (89%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| ||||| ||||||| | | |||| |||| | |||||||||| Sbjct 24185898 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 24185957 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 24185958 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 24186015 Score = 154 bits (170), Expect = 6e-34 Identities = 105/118 (89%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| ||||| ||||||| | | |||| |||| | |||||||||| Sbjct 42675899 TTTATGATACTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCG 42675840 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 42675839 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 42675782 >seq54 Length=3706658 Score = 140 bits (154), Expect = 1e-29 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 3 TTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGC 62 |||||||| ||||||| ||||| ||||||| | | |||| |||| | ||||||||||| Sbjct 1746861 TTATGATAGTATGCAATTTGTGTTACCAGATGTACATACAATATGTATGGGATTAGCCGC 1746920 Query 63 TTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||| | || ||||||||||||||||||| ||||||| |||||||||| Sbjct 1746921 TTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTATCAAACGTGTAGCATTCCC 1746977 >seq121 Length=1471777 Score = 96.9 bits (106), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 52 GGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTA 111 |||||||||| ||||||| ||||| | || |||||||||||||||||||||||||||||| Sbjct 925966 GGATTAGCCGTTTCAATGAGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTA 926025 Query 112 GCATTCCC 119 ||||| || Sbjct 926026 GCATTTCC 926033 >seq1261 Length=20693 Score = 87.8 bits (96), Expect = 7e-14 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 44 TATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCA 103 |||| | |||||||| |||||||||| |||| | || ||||||| |||||||||||||| Sbjct 3889 TATGTATGGGATTAGCTGCTTCAATGGAATCTTTCATTCTGGTCGAAGGAGAAATTACCA 3948 Query 104 AACGTCTAGCATTCCC 119 || ||| ||||||||| Sbjct 3949 AATGTCCAGCATTCCC 3964 >seq1309 Length=319573 Score = 80.6 bits (88), Expect = 1e-11 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||| ||||||||| ||||| ||| || | | |||| |||| | |||||||||| Sbjct 41072 TTTATGAGACTATGCAATTTGTGTCACCGGATGTACATACAATATGTATGGGATTAGCCG 41131 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGA 93 |||||||||||| | || |||| ||||||| Sbjct 41132 GCTCAATGGGATCTTTCATTCTGGGCGGAGGA 41163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19027737861120