Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq57780 84.2 1e-12 seq2 84.2 1e-12 >seq57780 Length=404758 Score = 84.2 bits (92), Expect = 1e-12 Identities = 64/72 (89%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || ||||||||| ||||||||||||||||||||||||||| |||||||| |||| Sbjct 122968 GCCCGCGTCGACCTTTTACCTAATAAATGCATCCCTTCCAGAAGTCGGGGGTTTGGTGCA 123027 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 123028 CGTATTAGCTCT 123039 >seq2 Length=81761211 Score = 84.2 bits (92), Expect = 1e-12 Identities = 64/72 (89%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || ||||||||| ||||||||||||||||||||||||||| |||||||| |||| Sbjct 18229584 GCCCGCGTCGACCTTTTACCTAATAAATGCATCCCTTCCAGAAGTCGGGGGTTTGGTGCA 18229643 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 18229644 CGTATTAGCTCT 18229655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28377771461952