Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq80317 154 6e-34 seq80316 145 3e-31 seq30315 111 6e-21 seq664 80.6 1e-11 seq40 80.6 1e-11 >seq80317 Length=158462 Score = 154 bits (170), Expect = 6e-34 Identities = 105/118 (89%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | |||| ||||| | |||||||||| Sbjct 72990 TTTATGATACTATGCAATTTGTGCCACCCGATGTGCATACAATATGCATGGGATTAGCCG 72931 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 72930 CTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 72873 >seq80316 Length=715001 Score = 145 bits (160), Expect = 3e-31 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 5 ATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTT 64 || ||||||||||| |||||| ||| || | | |||| ||||| | ||||||||||||| Sbjct 346098 ATTATACTATGCAATTTGTGCCACCCGATGTGCATACAATATGCATGGGATTAGCCGCTT 346157 Query 65 CAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct 346158 CAATGGGATCTTTCATTCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 346212 >seq30315 Length=1065 Score = 111 bits (122), Expect = 6e-21 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 39 TACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAAT 98 |||| ||||| | |||||||||||||||||||||||| | || ||||||||||||||||| Sbjct 440 TACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAAT 381 Query 99 TACCAAACGTCTAGCATTCCC 119 |||||||| ||||||||| || Sbjct 380 TACCAAACATCTAGCATTTCC 360 >seq664 Length=141218 Score = 80.6 bits (88), Expect = 1e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 39 TACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAA 97 |||| ||||| | |||||||||||||||||||||||| | || |||||||||||||||| Sbjct 105410 TACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAA 105468 >seq40 Length=1536145 Score = 80.6 bits (88), Expect = 1e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 39 TACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAA 97 |||| ||||| | |||||||||||||||||||||||| | || |||||||||||||||| Sbjct 129407 TACAATATGCATGGGATTAGCCGCTTCAATGGGATCTTTCATTCTGGTCGGAGGAGAAA 129465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19029668362560