Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_007362.1 Length=1760 Score E Sequences producing significant alignments: (Bits) Value seq64 109 6e-21 seq133 98.7 1e-17 seq2555 80.6 3e-12 >seq64 Length=1183440 Score = 109 bits (120), Expect = 6e-21 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1066 TTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTAT 1125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 573506 TTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTAC 573565 Query 1126 GGG 1128 ||| Sbjct 573566 GGG 573568 Score = 98.7 bits (108), Expect = 1e-17 Identities = 58/59 (98%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 1065 ATTTGGAGCTATAGCAGGTTTT-ATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGG 1122 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1041712 ATTTGGAGCTATAGCAGGTTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGG 1041770 >seq133 Length=742459 Score = 98.7 bits (108), Expect = 1e-17 Identities = 54/54 (100%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 1066 TTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGT 1119 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 583967 TTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGT 584020 >seq2555 Length=18234 Score = 80.6 bits (88), Expect = 3e-12 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 1074 TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTT 1120 |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10522 TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGTTT 10476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5518486677172